RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CYP39A1Q9NYL5 469 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 OGDHLQ9ULD0 1010 aa18.52■□□□□ 0.56
DDX41-214ENST00000512334 SYNGAP1Q96PV0 1343 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 SEPT4O43236 478 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 DDAH1O94760 285 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 HSPA4P34932 840 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 BAATQ14032 418 aaPredicted RBP18.51■□□□□ 0.55
DDX41-214ENST00000512334 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
DDX41-214ENST00000512334 FGD4Q96M96 766 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 TCEANC2Q96MN5 208 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 NRBP1Q9UHY1 535 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 ZHX1Q9UKY1 873 aaPredicted RBP18.51■□□□□ 0.55
DDX41-214ENST00000512334 MYH6P13533 1939 aa18.51■□□□□ 0.55
DDX41-214ENST00000512334 MKI67P46013 3256 aaKnown RBP18.5■□□□□ 0.55
DDX41-214ENST00000512334 CALML3P27482 149 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 KIF5BP33176 963 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 LIFRP42702 1097 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 MAMDC4Q6UXC1 1216 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 ARMCX2Q7L311 632 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 DHX32Q7L7V1 743 aaKnown RBP18.5■□□□□ 0.55
DDX41-214ENST00000512334 FBXO11Q86XK2 927 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 ANKLE1Q8NAG6 615 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 DIS3LQ8TF46 1054 aaKnown RBP18.5■□□□□ 0.55
DDX41-214ENST00000512334 CLEC4DQ8WXI8 215 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 PAWRQ96IZ0 340 aaKnown RBP18.5■□□□□ 0.55
DDX41-214ENST00000512334 JAKMIP1Q96N16 626 aaKnown RBP18.5■□□□□ 0.55
DDX41-214ENST00000512334 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.5■□□□□ 0.55
DDX41-214ENST00000512334 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
DDX41-214ENST00000512334 ABCB11O95342 1321 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 FRMPD3Q5JV73 1810 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 SOWAHBA6NEL2 793 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 SNAI1O95863 264 aaPredicted RBP18.49■□□□□ 0.55
DDX41-214ENST00000512334 HMGB1P09429 215 aaKnown RBP18.49■□□□□ 0.55
DDX41-214ENST00000512334 RXRAP19793 462 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 FGD1P98174 961 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 SLC30A10Q6XR72 485 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 RNF207Q6ZRF8 634 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 NECAB2Q7Z6G3 386 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 UBE2Q1Q7Z7E8 422 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 RAB11FIP4Q86YS3 637 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 CCDC144CPQ8IYA2 1237 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 PURBQ96QR8 312 aaKnown RBP18.49■□□□□ 0.55
DDX41-214ENST00000512334 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
DDX41-214ENST00000512334 ASB14A6NK59 587 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 ZBTB5O15062 677 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
DDX41-214ENST00000512334 ZNF865P0CJ78 1059 aaPredicted RBP18.48■□□□□ 0.55
DDX41-214ENST00000512334 CALM1P0DP23 149 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 CALM2P0DP24 149 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 CALM3P0DP25 149 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 EXOSC10Q01780 885 aaKnown RBP18.48■□□□□ 0.55
DDX41-214ENST00000512334 KCNB2Q92953 911 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 PIGSQ96S52 555 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 MAP3K14Q99558 947 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 HTATIP2Q9BUP3 242 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 AMNQ9BXJ7 453 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 MRPL11Q9Y3B7 192 aaKnown RBP18.48■□□□□ 0.55
DDX41-214ENST00000512334 MCM3APO60318 1980 aa18.48■□□□□ 0.55
DDX41-214ENST00000512334 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
DDX41-214ENST00000512334 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
DDX41-214ENST00000512334 RARBP10826 455 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 AKR1A1P14550 325 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 CPA1P15085 419 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 RPS6P62753 249 aaKnown RBP18.47■□□□□ 0.55
DDX41-214ENST00000512334 ACVR2BQ13705 512 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 BLOC1S2Q6QNY1 142 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 MICU3Q86XE3 530 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 DPF3Q92784 378 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 MTMR8Q96EF0 704 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 ABHD16BQ9H3Z7 469 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 C11orf49Q9H6J7 331 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
DDX41-214ENST00000512334 CYTH3O43739 400 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 PSMA5P28066 241 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 GNAQP50148 359 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 SLC35G1Q2M3R5 365 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 SGMS1Q86VZ5 419 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 MCF2L2Q86YR7 1114 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 USP26Q9BXU7 913 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
DDX41-214ENST00000512334 FAM184BQ9ULE4 1060 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
DDX41-214ENST00000512334 PCDHA1Q9Y5I3 950 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
DDX41-214ENST00000512334 BAZ2BQ9UIF8 2168 aaKnown RBP18.46■□□□□ 0.55
DDX41-214ENST00000512334 ASTN1O14525 1302 aa18.46■□□□□ 0.55
DDX41-214ENST00000512334 LCTP09848 1927 aa18.45■□□□□ 0.54
DDX41-214ENST00000512334 PPP1R11O60927 126 aaPredicted RBP18.45■□□□□ 0.54
DDX41-214ENST00000512334 MNX1P50219 401 aaPredicted RBP18.45■□□□□ 0.54
DDX41-214ENST00000512334 ALDH5A1P51649 535 aaPredicted RBP18.45■□□□□ 0.54
DDX41-214ENST00000512334 GJC2Q5T442 439 aaPredicted RBP18.45■□□□□ 0.54
DDX41-214ENST00000512334 EEPD1Q7L9B9 569 aa18.45■□□□□ 0.54
DDX41-214ENST00000512334 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
DDX41-214ENST00000512334 LENG1Q96BZ8 264 aaPredicted RBP18.45■□□□□ 0.54
DDX41-214ENST00000512334 LZTS2Q9BRK4 669 aa18.45■□□□□ 0.54
DDX41-214ENST00000512334 XPNPEP3Q9NQH7 507 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms