RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 C6orf222P0C671 652 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 NT5C2P49902 561 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 CCSAPQ6IQ19 270 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 FAM126BQ8IXS8 530 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 ARNTL2Q8WYA1 636 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 ANKS1AQ92625 1134 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 SEC62Q99442 399 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 PHOX2BQ99453 314 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 WDR19Q8NEZ3 1342 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 ZNF532Q9HCE3 1301 aa12.31□□□□□ -0.44
PDLIM5-217ENST00000512274 BDP1A6H8Y1 2624 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 M0R2C6 588 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 IDH1O75874 414 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 CD2BP2O95400 341 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 POU3F3P20264 500 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 NEK4P51957 841 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 SEPT2Q15019 361 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 ANKRD1Q15327 319 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 ZNF792Q3KQV3 632 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 GIMAP6Q6P9H5 292 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 STRBPQ96SI9 672 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 AGXT2Q9BYV1 514 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 FAM184BQ9ULE4 1060 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 ELP1O95163 1332 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
PDLIM5-217ENST00000512274 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 FLOT1O75955 427 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 CYP21A2P08686 494 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 DSG3P32926 999 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 GUCY1A2P33402 732 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 PPP4CP60510 307 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 KIAA1755Q5JYT7 1200 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 GJD3Q8N144 294 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 SCLYQ96I15 445 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
PDLIM5-217ENST00000512274 PARP14Q460N5 1801 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 MPHOSPH10O00566 681 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 ARHGEF15O94989 841 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 CD4P01730 458 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 USP5P45974 858 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 KCTD2Q14681 263 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 COL4A4P53420 1690 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-217ENST00000512274 SCN5AQ14524 2016 aa12.27□□□□□ -0.44
PDLIM5-217ENST00000512274 PATL2C9JE40 543 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 ADCY6O43306 1168 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 DUSP11O75319 330 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 SLC25A27O95847 323 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 SNAI1O95863 264 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 FGAP02671 866 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 CASTP20810 708 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 RPS6KB1P23443 525 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 GRB10Q13322 594 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 TTLL4Q14679 1199 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 IMMTQ16891 758 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 ADCK5Q3MIX3 580 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 BLOC1S2Q6QNY1 142 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 SPRED2Q7Z698 418 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 SPICE1Q8N0Z3 855 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 MAGEB6Q8N7X4 407 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 RIOK1Q9BRS2 568 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 WNT8AQ9H1J5 351 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 LIMCH1Q9UPQ0 1083 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 DIS3Q9Y2L1 958 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 ROBO3Q96MS0 1386 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 CHD9Q3L8U1 2897 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 MCM3APO60318 1980 aa12.27□□□□□ -0.45
PDLIM5-217ENST00000512274 ALADP13716 330 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 IL9P15248 144 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 CST5P28325 142 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 SHMT1P34896 483 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 EVCP57679 992 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 BEX3Q00994 111 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 TAP1Q03518 808 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 DEFB128Q7Z7B8 93 aa12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 RPUSD2Q8IZ73 545 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-217ENST00000512274 TMX3Q96JJ7 454 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms