RNA–Protein interactions for RNA: ENST00000512194.1

HERC3-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-210ENST00000512194 HYPKQ9NX55 129 aa9.12□□□□□ -0.95
HERC3-210ENST00000512194 NOB1Q9ULX3 412 aaKnown RBP9.12□□□□□ -0.95
HERC3-210ENST00000512194 TIAM2Q8IVF5 1701 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 ADAMTS7Q9UKP4 1686 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 A0A0A0MRY4 1105 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 GNB5O14775 395 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 PLIN1O60240 522 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 BPNT1O95861 308 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 CRKP46108 304 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 RPL6Q02878 288 aaKnown RBP9.11□□□□□ -0.95
HERC3-210ENST00000512194 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
HERC3-210ENST00000512194 MCF2L2Q86YR7 1114 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 FMR1NBQ8N0W7 255 aaPredicted RBP9.11□□□□□ -0.95
HERC3-210ENST00000512194 TRIM11Q96F44 468 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 ATG3Q9NT62 314 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 MKL2Q9ULH7 1088 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 STRIP2Q9ULQ0 834 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 EFR3BQ9Y2G0 817 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 C10orf71Q711Q0 1435 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 HEG1Q9ULI3 1381 aa9.11□□□□□ -0.95
HERC3-210ENST00000512194 SCN11AQ9UI33 1791 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 TCERG1O14776 1098 aaKnown RBP9.1□□□□□ -0.95
HERC3-210ENST00000512194 NLRP12P59046 1061 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
HERC3-210ENST00000512194 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
HERC3-210ENST00000512194 GPBAR1Q8TDU6 330 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 USP26Q9BXU7 913 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 ZC3H12CQ9C0D7 883 aaKnown RBP9.1□□□□□ -0.95
HERC3-210ENST00000512194 CCDC86Q9H6F5 360 aaKnown RBP9.1□□□□□ -0.95
HERC3-210ENST00000512194 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
HERC3-210ENST00000512194 GINM1Q9NU53 330 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
HERC3-210ENST00000512194 SYNGAP1Q96PV0 1343 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 DLL1O00548 723 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 ADAM11O75078 769 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 ECEL1O95672 775 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 NASPP49321 788 aaPredicted RBP9.09□□□□□ -0.95
HERC3-210ENST00000512194 SNRPNP63162 240 aaKnown RBP9.09□□□□□ -0.95
HERC3-210ENST00000512194 IRX6P78412 446 aaPredicted RBP9.09□□□□□ -0.95
HERC3-210ENST00000512194 PTPN11Q06124 597 aaPredicted RBP9.09□□□□□ -0.95
HERC3-210ENST00000512194 REC114Q7Z4M0 266 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
HERC3-210ENST00000512194 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 FLAD1Q8NFF5 587 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 PLVAPQ9BX97 442 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 SNCAIPQ9Y6H5 919 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 AFDNP55196 1824 aaKnown RBP9.09□□□□□ -0.95
HERC3-210ENST00000512194 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
HERC3-210ENST00000512194 ZNF831Q5JPB2 1677 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 A0A0G2JLW4 131 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 DDX3YO15523 660 aaKnown RBP9.08□□□□□ -0.96
HERC3-210ENST00000512194 CTSBP07858 339 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 HSPA1AP0DMV8 641 aaKnown RBP9.08□□□□□ -0.96
HERC3-210ENST00000512194 HSPA1BP0DMV9 641 aaKnown RBP9.08□□□□□ -0.96
HERC3-210ENST00000512194 ZNF165P49910 485 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 CCT4P50991 539 aaKnown RBP9.08□□□□□ -0.96
HERC3-210ENST00000512194 TRIM28Q13263 835 aaKnown RBP9.08□□□□□ -0.96
HERC3-210ENST00000512194 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 FBXO27Q8NI29 283 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 DDX19BQ9UMR2 479 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 PCDHA4Q9UN74 947 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 HDAC5Q9UQL6 1122 aa9.08□□□□□ -0.96
HERC3-210ENST00000512194 DICER1Q9UPY3 1922 aaKnown RBP9.07□□□□□ -0.96
HERC3-210ENST00000512194 TLR3O15455 904 aaKnown RBP9.07□□□□□ -0.96
HERC3-210ENST00000512194 ZNF862O60290 1169 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 TRIM27P14373 513 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 GTF2F1P35269 517 aaKnown RBP eCLIP9.07□□□□□ -0.96
HERC3-210ENST00000512194 NEXNQ0ZGT2 675 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 EXOSC6Q5RKV6 272 aaKnown RBP9.07□□□□□ -0.96
HERC3-210ENST00000512194 ITPRIPQ8IWB1 547 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 PANK1Q8TE04 598 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 CRBNQ96SW2 442 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 KCNK4Q9NYG8 393 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 NOP53Q9NZM5 478 aaKnown RBP9.07□□□□□ -0.96
HERC3-210ENST00000512194 USP16Q9Y5T5 823 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 VIRMAQ69YN4 1812 aaKnown RBP9.07□□□□□ -0.96
HERC3-210ENST00000512194 KDM3BQ7LBC6 1761 aa9.07□□□□□ -0.96
HERC3-210ENST00000512194 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
HERC3-210ENST00000512194 MMP10P09238 476 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 MYL6BP14649 208 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 RBL2Q08999 1139 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 FSTL1Q12841 308 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 ITPK1Q13572 414 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 MVPQ14764 893 aaKnown RBP9.06□□□□□ -0.96
HERC3-210ENST00000512194 DUOXA2Q1HG44 320 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 SLC4A10Q6U841 1118 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 IGF2-ASQ6U949 168 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 DNAJC10Q8IXB1 793 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 TACC3Q9Y6A5 838 aa9.06□□□□□ -0.96
HERC3-210ENST00000512194 SIPA1L3O60292 1781 aaPredicted RBP9.05□□□□□ -0.96
HERC3-210ENST00000512194 PRAMEF22A3QJZ6 481 aa9.05□□□□□ -0.96
HERC3-210ENST00000512194 MEGF11A6BM72 1044 aa9.05□□□□□ -0.96
HERC3-210ENST00000512194 GFRA2O00451 464 aa9.05□□□□□ -0.96
HERC3-210ENST00000512194 STK10O94804 968 aaKnown RBP9.05□□□□□ -0.96
HERC3-210ENST00000512194 ELNP15502 786 aa9.05□□□□□ -0.96
HERC3-210ENST00000512194 DPEP1P16444 411 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms