RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZFATQ9P243 1243 aa5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 VIRMAQ69YN4 1812 aaKnown RBP5.72□□□□□ -1.49
TRAPPC11-208ENST00000511955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 BHMG1C9JSJ3 638 aaPredicted RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 SGTAO43765 313 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 OATP04181 439 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 CAPN3P20807 821 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 HSPA4P34932 840 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 ATP6V1E1P36543 226 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 GTF2A2P52657 109 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 CFAP58Q5T655 872 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 TDRD7Q8NHU6 1098 aaKnown RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 GSDMBQ8TAX9 411 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 NUP133Q8WUM0 1156 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 UIMC1Q96RL1 719 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 NPDC1Q9NQX5 325 aaPredicted RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 ZMAT5Q9UDW3 170 aaKnown RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 PNMA8BQ9ULN7 279 aaPredicted RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 DMTF1Q9Y222 760 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 ZBTB1Q9Y2K1 713 aa5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 V9GY48 417 aaPredicted RBP5.71□□□□□ -1.49
TRAPPC11-208ENST00000511955 MRC1P22897 1456 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 HEG1Q9ULI3 1381 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 GOLGA6L3A6NEY3 463 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZBBXA8MT70 800 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 F5H423 210 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 ZBTB24O43167 697 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 NDUFB5O43674 189 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 STARD3NLO95772 234 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 SNRPA1P09661 255 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 CYP19A1P11511 503 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 RAD52P43351 418 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 EIF4A1P60842 406 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 MAP3K9P80192 1104 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 SLC7A5Q01650 507 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 MYBPC3Q14896 1274 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 ELF2Q15723 593 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 TUBB8Q3ZCM7 444 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 PLBD1Q6P4A8 553 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 YIPF4Q9BSR8 244 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 STAP2Q9UGK3 403 aa5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 RTCBQ9Y3I0 505 aaKnown RBP5.71□□□□□ -1.5
TRAPPC11-208ENST00000511955 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 KCPQ6ZWJ8 1503 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 A0A0B4J203 849 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 LINC00854A0A1B0GVQ3 168 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 GALNSP34059 522 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 CAP2P40123 477 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 MRE11P49959 708 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ATN1P54259 1190 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 GNAI1P63096 354 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ITKQ08881 620 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 IFRD2Q12894 506 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 AIMP1Q12904 312 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 NAA30Q147X3 362 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 TCEA2Q15560 299 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 MUM1Q2TAK8 710 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 GPATCH4Q5T3I0 446 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 IER5LQ5T953 404 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ASTLQ6HA08 431 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 FIP1L1Q6UN15 594 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 COL23A1Q86Y22 540 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 RNF135Q8IUD6 432 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 C7orf61Q8IZ16 206 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 CELF2-AS1Q8N7Q2 184 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 TSPYL6Q8N831 410 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 C8orf58Q8NAV2 365 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 OR8H1Q8NGG4 311 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 LILRB1Q8NHL6 650 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 USP33Q8TEY7 942 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 POF1BQ8WVV4 589 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 FAM81BQ96LP2 452 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 DNAI2Q9GZS0 605 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 FANCFQ9NPI8 374 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ST7Q9NRC1 585 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 PIH1D1Q9NWS0 290 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 CEP72Q9P209 647 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 SRP68Q9UHB9 627 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 R3HCC1Q9Y3T6 440 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 NUP188Q5SRE5 1749 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ATP5J2-PTCD1G3V325 749 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 MUSKO15146 869 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 GPR182O15218 404 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ATMINO43313 823 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 MMEP08473 750 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 TYRP1P17643 537 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 GRK2P25098 689 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 RFC4P35249 363 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 ATP13A4Q4VNC1 1196 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 NUGGCQ68CJ6 796 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 INTS5Q6P9B9 1019 aaKnown RBP5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 BICDL1Q6ZP65 573 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 TPH2Q8IWU9 490 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 TEX11Q8IYF3 940 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 FAM26EQ8N5C1 309 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 NKX2-3Q8TAU0 364 aa5.7□□□□□ -1.5
TRAPPC11-208ENST00000511955 STON2Q8WXE9 905 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms