RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 MYH8P13535 1937 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 SYNGAP1Q96PV0 1343 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 DNAJC25-GNG10A0A024R161 153 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 TSPY2A6NKD2 308 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 B4E1Z4 1266 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 KDM4AO75164 1064 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 ADAMTS4O75173 837 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 SNAI1O95863 264 aaPredicted RBP13.24□□□□□ -0.29
UBE2B-208ENST00000511807 CLTBP09497 229 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 BMP3P12645 472 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 NEK4P51957 841 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
UBE2B-208ENST00000511807 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
UBE2B-208ENST00000511807 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
UBE2B-208ENST00000511807 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 NEDD1Q8NHV4 660 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 KIF2CQ99661 725 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 MTA3Q9BTC8 594 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 SLC38A10Q9HBR0 1119 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 INCENPQ9NQS7 918 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 ZSWIM5Q9P217 1185 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 FBXO40Q9UH90 709 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 LAMA3Q16787 3333 aa13.24□□□□□ -0.29
UBE2B-208ENST00000511807 NEDD4P46934 1319 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 WDR19Q8NEZ3 1342 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 ERICH2A1L162 156 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 TMEM232C9JQI7 657 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 ST18O60284 1047 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 RAG1P15918 1043 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 RPS6KB1P23443 525 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 ACLYP53396 1101 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 FGD1P98174 961 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 MAMDC4Q6UXC1 1216 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 MB21D2Q8IYB1 491 aaPredicted RBP13.23□□□□□ -0.29
UBE2B-208ENST00000511807 CHST13Q8NET6 341 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 TMEM87BQ96K49 555 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 GUCD1Q96NT3 240 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 UBAC1Q9BSL1 405 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 STARD7Q9NQZ5 370 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 TMEM39AQ9NV64 488 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.23□□□□□ -0.29
UBE2B-208ENST00000511807 SYNPO2Q9UMS6 1093 aa13.23□□□□□ -0.29
UBE2B-208ENST00000511807 DCDC2CA8MYV0 355 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 PRC1O43663 620 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 C6orf222P0C671 652 aaPredicted RBP13.22□□□□□ -0.29
UBE2B-208ENST00000511807 ITGB8P26012 769 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 SLC1A4P43007 532 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 STAT2P52630 851 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 OAZ1P54368 228 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 EXOSC10Q01780 885 aaKnown RBP13.22□□□□□ -0.29
UBE2B-208ENST00000511807 ACVR2BQ13705 512 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 KCNA10Q16322 511 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 ZNF467Q7Z7K2 595 aaPredicted RBP13.22□□□□□ -0.29
UBE2B-208ENST00000511807 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
UBE2B-208ENST00000511807 UPF3BQ9BZI7 483 aaKnown RBP13.22□□□□□ -0.29
UBE2B-208ENST00000511807 STX8Q9UNK0 236 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 PARP14Q460N5 1801 aa13.22□□□□□ -0.29
UBE2B-208ENST00000511807 PLIN4Q96Q06 1357 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.29
UBE2B-208ENST00000511807 MYADML2A6NDP7 307 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.29
UBE2B-208ENST00000511807 DUSP11O75319 330 aaKnown RBP13.21□□□□□ -0.29
UBE2B-208ENST00000511807 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
UBE2B-208ENST00000511807 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 ARMCX2Q7L311 632 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 GMCL1Q96IK5 515 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 RNPC3Q96LT9 517 aaKnown RBP13.21□□□□□ -0.29
UBE2B-208ENST00000511807 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.29
UBE2B-208ENST00000511807 ABHD16BQ9H3Z7 469 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 ACAD9Q9H845 621 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 SPC25Q9HBM1 224 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 MTMR7Q9Y216 660 aa13.21□□□□□ -0.29
UBE2B-208ENST00000511807 COL11A1P12107 1806 aaPredicted RBP13.2□□□□□ -0.3
UBE2B-208ENST00000511807 KIAA0355O15063 1070 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 ADCY6O43306 1168 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 FDX1P10109 184 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 CPA1P15085 419 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 MCM2P49736 904 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 EPHB4P54760 987 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
UBE2B-208ENST00000511807 FPGSQ05932 587 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms