RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HAUS7Q99871 368 aa22.79■■□□□ 1.24
HMGCS1-206ENST00000511774 TSPYL2Q9H2G4 693 aaPredicted RBP22.79■■□□□ 1.24
HMGCS1-206ENST00000511774 ZBBXA8MT70 800 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 CA3P07451 260 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 ATP2A2P16615 1042 aaKnown RBP22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 ATP5JP18859 108 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 POU3F3P20264 500 aaPredicted RBP22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 SKIV2LQ15477 1246 aaKnown RBP22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 LRRC47Q8N1G4 583 aaKnown RBP22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 C11orf16Q9NQ32 467 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 A1CFQ9NQ94 594 aaKnown RBP22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 ARPP21Q9UBL0 812 aaPredicted RBP22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 FBXO40Q9UH90 709 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 PTPRSQ13332 1948 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 ZNF536O15090 1300 aa22.78■■□□□ 1.24
HMGCS1-206ENST00000511774 GSG1L2A8MUP6 293 aa22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 DYNC1LI2O43237 492 aaPredicted RBP22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 CABYRO75952 493 aa22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 SBK1Q52WX2 424 aa22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 TAPT1Q6NXT6 567 aa22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 SPRED2Q7Z698 418 aa22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 CEP95Q96GE4 821 aa22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 STRBPQ96SI9 672 aaKnown RBP22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.77■■□□□ 1.24
HMGCS1-206ENST00000511774 TLL1O43897 1013 aa22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 CYP2C9P11712 490 aa22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 MKL1Q969V6 931 aa22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 DDRGK1Q96HY6 314 aa22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 ALDH8A1Q9H2A2 487 aaPredicted RBP22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 TRMT13Q9NUP7 481 aaKnown RBP22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 FEM1BQ9UK73 627 aa22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 CTDP1Q9Y5B0 961 aaPredicted RBP22.76■■□□□ 1.23
HMGCS1-206ENST00000511774 COL4A4P53420 1690 aaPredicted RBP22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 PRDM1O75626 825 aa22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 OAZ1P54368 228 aa22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 EEPD1Q7L9B9 569 aa22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 FBXO16Q8IX29 292 aaPredicted RBP22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 PURBQ96QR8 312 aaKnown RBP22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 MKNK2Q9HBH9 465 aa22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 EPB41L4AQ9HCS5 686 aaPredicted RBP22.75■■□□□ 1.23
HMGCS1-206ENST00000511774 MINDY4BA8MYZ0 360 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 RBAK-RBAKDNI3L0D1 243 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 AAK1Q2M2I8 961 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 DEFB128Q7Z7B8 93 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 RPUSD2Q8IZ73 545 aaKnown RBP22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 PPP1R13LQ8WUF5 828 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 CHMP4CQ96CF2 233 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 ACAD9Q9H845 621 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 RNF146Q9NTX7 359 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 MTMR4Q9NYA4 1195 aa22.74■■□□□ 1.23
HMGCS1-206ENST00000511774 SNAP25P60880 206 aa22.73■■□□□ 1.23
HMGCS1-206ENST00000511774 TMEM67Q5HYA8 995 aa22.73■■□□□ 1.23
HMGCS1-206ENST00000511774 GMCL1P1Q8NEA9 526 aa22.73■■□□□ 1.23
HMGCS1-206ENST00000511774 AP5M1Q9H0R1 490 aa22.73■■□□□ 1.23
HMGCS1-206ENST00000511774 SCN10AQ9Y5Y9 1956 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 FAM86C2PA6NEL3 165 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 TMEM232C9JQI7 657 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 TAP1Q03518 808 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 MUM1L1Q5H9M0 696 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 RASGRP2Q7LDG7 609 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 OSBP2Q969R2 916 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 CD320Q9NPF0 282 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 ARIH1Q9Y4X5 557 aaPredicted RBP22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 TANC1Q9C0D5 1861 aa22.72■■□□□ 1.23
HMGCS1-206ENST00000511774 ASB14A6NK59 587 aa22.71■■□□□ 1.23
HMGCS1-206ENST00000511774 BMP3P12645 472 aa22.71■■□□□ 1.23
HMGCS1-206ENST00000511774 SLFN13Q68D06 897 aa22.71■■□□□ 1.23
HMGCS1-206ENST00000511774 COG6Q9Y2V7 657 aa22.71■■□□□ 1.23
HMGCS1-206ENST00000511774 LPXNO60711 386 aa22.7■■□□□ 1.22
HMGCS1-206ENST00000511774 TMEM31Q5JXX7 168 aa22.7■■□□□ 1.22
HMGCS1-206ENST00000511774 ARNTL2Q8WYA1 636 aa22.7■■□□□ 1.22
HMGCS1-206ENST00000511774 TRERF1Q96PN7 1200 aa22.7■■□□□ 1.22
HMGCS1-206ENST00000511774 TNKSO95271 1327 aa22.7■■□□□ 1.22
HMGCS1-206ENST00000511774 TRIP12Q14669 1992 aaPredicted RBP22.7■■□□□ 1.22
HMGCS1-206ENST00000511774 CCER2I3L3R5 266 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 GTPBP6O43824 516 aaPredicted RBP22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 IQSEC1Q6DN90 963 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 SEZ6LQ9BYH1 1024 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 CYP39A1Q9NYL5 469 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 COG5Q9UP83 839 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 Q9Y3F1 56 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 HCN4Q9Y3Q4 1203 aa22.69■■□□□ 1.22
HMGCS1-206ENST00000511774 PLIN4Q96Q06 1357 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 ZEB2O60315 1214 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 RAB11FIP3O75154 756 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 TTLL1O95922 423 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 ALAS1P13196 640 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 GRB10Q13322 594 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 GIMAP6Q6P9H5 292 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 RPAP2Q8IXW5 612 aaPredicted RBP22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 MORC4Q8TE76 937 aa22.68■■□□□ 1.22
HMGCS1-206ENST00000511774 PFKMP08237 780 aa22.67■■□□□ 1.22
HMGCS1-206ENST00000511774 STAT2P52630 851 aa22.67■■□□□ 1.22
HMGCS1-206ENST00000511774 PURAQ00577 322 aaKnown RBP22.67■■□□□ 1.22
HMGCS1-206ENST00000511774 KIAA1211Q6ZU35 1233 aa22.67■■□□□ 1.22
HMGCS1-206ENST00000511774 SYNPO2Q9UMS6 1093 aa22.67■■□□□ 1.22
HMGCS1-206ENST00000511774 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 GPR37L1O60883 481 aa22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 DUSP28Q4G0W2 176 aa22.66■■□□□ 1.22
HMGCS1-206ENST00000511774 ZSCAN25Q6NSZ9 544 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms