RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CYP39A1Q9NYL5 469 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
DDX41-212ENST00000511040 PFASO15067 1338 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 PTPDC1A2A3K4 754 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 SOWAHBA6NEL2 793 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 SNAI1O95863 264 aaPredicted RBP16.27■□□□□ 0.2
DDX41-212ENST00000511040 BAATQ14032 418 aaPredicted RBP16.27■□□□□ 0.2
DDX41-212ENST00000511040 KRT32Q14532 448 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 SLC30A10Q6XR72 485 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 DHX32Q7L7V1 743 aaKnown RBP16.27■□□□□ 0.2
DDX41-212ENST00000511040 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 FAM133AQ8N9E0 248 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 PIBF1Q8WXW3 757 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 KCNB2Q92953 911 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 JAKMIP1Q96N16 626 aaKnown RBP16.27■□□□□ 0.2
DDX41-212ENST00000511040 OGDHLQ9ULD0 1010 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 SNX14Q9Y5W7 946 aa16.27■□□□□ 0.2
DDX41-212ENST00000511040 DDAH1O94760 285 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 CALML3P27482 149 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 EXOSC10Q01780 885 aaKnown RBP16.26■□□□□ 0.19
DDX41-212ENST00000511040 ARMCX2Q7L311 632 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 UBE2Q1Q7Z7E8 422 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
DDX41-212ENST00000511040 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 PAWRQ96IZ0 340 aaKnown RBP16.26■□□□□ 0.19
DDX41-212ENST00000511040 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.26■□□□□ 0.19
DDX41-212ENST00000511040 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
DDX41-212ENST00000511040 PNMA2Q9UL42 364 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
DDX41-212ENST00000511040 MCM3APO60318 1980 aa16.26■□□□□ 0.19
DDX41-212ENST00000511040 ASTN1O14525 1302 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 SEPT4O43236 478 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 CYTH3O43739 400 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 LIFRP42702 1097 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 RNF207Q6ZRF8 634 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 TBC1D5Q92609 795 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 LENG1Q96BZ8 264 aaPredicted RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 PIGSQ96S52 555 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 SLC12A7Q9Y666 1083 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 BAZ2BQ9UIF8 2168 aaKnown RBP16.25■□□□□ 0.19
DDX41-212ENST00000511040 MYH6P13533 1939 aa16.25■□□□□ 0.19
DDX41-212ENST00000511040 FRMPD3Q5JV73 1810 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 ABCB11O95342 1321 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 LCTP09848 1927 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 PLEKHA8P1O95397 391 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 ZNF865P0CJ78 1059 aaPredicted RBP16.24■□□□□ 0.19
DDX41-212ENST00000511040 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
DDX41-212ENST00000511040 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
DDX41-212ENST00000511040 MSL3Q8N5Y2 521 aaKnown RBP16.24■□□□□ 0.19
DDX41-212ENST00000511040 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 USP26Q9BXU7 913 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
DDX41-212ENST00000511040 ZBTB5O15062 677 aa16.23■□□□□ 0.19
DDX41-212ENST00000511040 MSCO60682 206 aa16.23■□□□□ 0.19
DDX41-212ENST00000511040 KIF5BP33176 963 aa16.23■□□□□ 0.19
DDX41-212ENST00000511040 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
DDX41-212ENST00000511040 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
DDX41-212ENST00000511040 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
DDX41-212ENST00000511040 HMGB1P09429 215 aaKnown RBP16.22■□□□□ 0.19
DDX41-212ENST00000511040 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
DDX41-212ENST00000511040 FGD1P98174 961 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 GJC2Q5T442 439 aaPredicted RBP16.22■□□□□ 0.19
DDX41-212ENST00000511040 SYNE3Q6ZMZ3 975 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 Q6ZUG5 572 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 NECAB2Q7Z6G3 386 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 SRBD1Q8N5C6 995 aaKnown RBP16.22■□□□□ 0.19
DDX41-212ENST00000511040 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 MAP3K14Q99558 947 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
DDX41-212ENST00000511040 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
DDX41-212ENST00000511040 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
DDX41-212ENST00000511040 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 ASB14A6NK59 587 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 PGK1P00558 417 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 CALM1P0DP23 149 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 CALM2P0DP24 149 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 CALM3P0DP25 149 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 RARBP10826 455 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 AKR1A1P14550 325 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 CAPN2P17655 700 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
DDX41-212ENST00000511040 APOA5Q6Q788 366 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 FBXO16Q8IX29 292 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms