RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 C16orf59Q7L2K0 433 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 FAM126BQ8IXS8 530 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 TIFAQ96CG3 184 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 EVI5LQ96CN4 794 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 SEZ6LQ9BYH1 1024 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 PPP1R12CQ9BZL4 782 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 ZNF576Q9H609 170 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 CYP39A1Q9NYL5 469 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 MTMR7Q9Y216 660 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRIO-217ENST00000511019 Q9Y3F1 56 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 PLIN4Q96Q06 1357 aa9.86□□□□□ -0.83
TRIO-217ENST00000511019 SMCHD1A6NHR9 2005 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 COL11A1P12107 1806 aaPredicted RBP9.85□□□□□ -0.83
TRIO-217ENST00000511019 CD4P01730 458 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 FGBP02675 491 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 ACRP10323 421 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 SMPD1P17405 629 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 DNAJB2P25686 324 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 ITGA7Q13683 1181 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 CCDC96Q2M329 555 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 NSMFQ6X4W1 530 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 KIAA1211Q6ZU35 1233 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 EEPD1Q7L9B9 569 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 TLK2Q86UE8 772 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
TRIO-217ENST00000511019 PDGFCQ9NRA1 345 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 HELLSQ9NRZ9 838 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 TOMM22Q9NS69 142 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 ADD3Q9UEY8 706 aaKnown RBP9.85□□□□□ -0.83
TRIO-217ENST00000511019 ANAPC4Q9UJX5 808 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 CCPG1Q9ULG6 757 aa9.85□□□□□ -0.83
TRIO-217ENST00000511019 GNEQ9Y223 722 aaKnown RBP9.85□□□□□ -0.83
TRIO-217ENST00000511019 LTBP2Q14767 1821 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 PARP14Q460N5 1801 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 GRXCR1A8MXD5 290 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 ORC4O43929 436 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 ICAM1P05362 532 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 FGRP09769 529 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 TOP1P11387 765 aaKnown RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 CYP2C18P33260 490 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 SLC16A2P36021 539 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 NOVP48745 357 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 BAATQ14032 418 aaPredicted RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 ALX1Q15699 326 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 FSCN1Q16658 493 aaKnown RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 MCMDC2Q4G0Z9 681 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 VPS53Q5VIR6 699 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 TTBK2Q6IQ55 1244 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 TAPT1Q6NXT6 567 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 PSRC1Q6PGN9 363 aaPredicted RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 SLC43A3Q8NBI5 491 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 DCAF4Q8WV16 495 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 MTIF3Q9H2K0 278 aaKnown RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 IL23AQ9NPF7 189 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 MSRAQ9UJ68 235 aa9.84□□□□□ -0.83
TRIO-217ENST00000511019 GREB1LQ9C091 1923 aaPredicted RBP9.84□□□□□ -0.83
TRIO-217ENST00000511019 ASTN1O14525 1302 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 FOXP2O15409 715 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 FGAP02671 866 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 PBX2P40425 430 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 BTNL9Q6UXG8 535 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 TICAM2Q86XR7 235 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 RPUSD2Q8IZ73 545 aaKnown RBP9.83□□□□□ -0.84
TRIO-217ENST00000511019 HERVK_113Q902F9 699 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 TTC14Q96N46 770 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 PURBQ96QR8 312 aaKnown RBP9.83□□□□□ -0.84
TRIO-217ENST00000511019 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
TRIO-217ENST00000511019 TMEM47Q9BQJ4 181 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 PBX4Q9BYU1 374 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 RANBP17Q9H2T7 1088 aaKnown RBP9.83□□□□□ -0.84
TRIO-217ENST00000511019 HIPK3Q9H422 1215 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 VTA1Q9NP79 307 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 GPCPD1Q9NPB8 672 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 TCP11L1Q9NUJ3 509 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 PNMA2Q9UL42 364 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 MYH7P12883 1935 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 PLXNA1Q9UIW2 1896 aa9.83□□□□□ -0.84
TRIO-217ENST00000511019 GRIN2DO15399 1336 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 LOC102724159A0A0B4J2E5 919 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 SUPT20HL2P0C7V6 817 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 PDE1AP54750 535 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 CCL23P55773 120 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 PSMC6P62333 389 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 PWP2Q15269 919 aaKnown RBP9.82□□□□□ -0.84
TRIO-217ENST00000511019 RAB30Q15771 203 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 DUSP28Q4G0W2 176 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 TMEM63BQ5T3F8 832 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 SYDE2Q5VT97 1194 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 OTOP2Q7RTS6 562 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 FBXO16Q8IX29 292 aaPredicted RBP9.82□□□□□ -0.84
TRIO-217ENST00000511019 MORC4Q8TE76 937 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 PPM1EQ8WY54 764 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 MPHOSPH6Q99547 160 aaKnown RBP9.82□□□□□ -0.84
TRIO-217ENST00000511019 WDR11Q9BZH6 1224 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 TRPV6Q9H1D0 765 aa9.82□□□□□ -0.84
TRIO-217ENST00000511019 SLC28A3Q9HAS3 691 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms