RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PMS1P54277 932 aaKnown RBP11.17□□□□□ -0.62
USP53-206ENST00000510737 CYP4F8P98187 520 aa11.17□□□□□ -0.62
USP53-206ENST00000510737 FANCCQ00597 558 aa11.17□□□□□ -0.62
USP53-206ENST00000510737 AXDND1Q5T1B0 1012 aaPredicted RBP11.17□□□□□ -0.62
USP53-206ENST00000510737 RUFY4Q6ZNE9 571 aa11.17□□□□□ -0.62
USP53-206ENST00000510737 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
USP53-206ENST00000510737 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
USP53-206ENST00000510737 XYLT2Q9H1B5 865 aa11.17□□□□□ -0.62
USP53-206ENST00000510737 CEP170Q5SW79 1584 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 GSNP06396 782 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 AFF3P51826 1226 aaKnown RBP11.16□□□□□ -0.62
USP53-206ENST00000510737 MVKQ03426 396 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 LAPTM5Q13571 262 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 RAB3GAP1Q15042 981 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 RPTNQ6XPR3 784 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 TMEM151BQ8IW70 566 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 DHRS1Q96LJ7 313 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 DSCC1Q9BVC3 393 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 PCDHA5Q9Y5H7 936 aa11.16□□□□□ -0.62
USP53-206ENST00000510737 ABLIM1O14639 778 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 GSTM1P09488 218 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 ZNF76P36508 570 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 NCKAP1LP55160 1127 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 ZNF445P59923 1031 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 USP48Q86UV5 1035 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 FAM129CQ86XR2 697 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 TAB3Q8N5C8 712 aaPredicted RBP11.15□□□□□ -0.62
USP53-206ENST00000510737 RELTQ969Z4 430 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 PPT2Q9UMR5 302 aa11.15□□□□□ -0.62
USP53-206ENST00000510737 ENDOUP21128 410 aaKnown RBP11.14□□□□□ -0.63
USP53-206ENST00000510737 ARL4AP40617 200 aa11.14□□□□□ -0.63
USP53-206ENST00000510737 CBX2Q14781 532 aaPredicted RBP11.14□□□□□ -0.63
USP53-206ENST00000510737 BRF1Q92994 677 aa11.14□□□□□ -0.63
USP53-206ENST00000510737 FAM86C1Q9NVL1 165 aa11.14□□□□□ -0.63
USP53-206ENST00000510737 RACK1P63244 317 aaKnown RBP11.13□□□□□ -0.63
USP53-206ENST00000510737 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
USP53-206ENST00000510737 GP6Q9HCN6 339 aa11.13□□□□□ -0.63
USP53-206ENST00000510737 PLA2G2DQ9UNK4 145 aa11.13□□□□□ -0.63
USP53-206ENST00000510737 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
USP53-206ENST00000510737 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
USP53-206ENST00000510737 OTOL1A6NHN0 477 aaPredicted RBP11.12□□□□□ -0.63
USP53-206ENST00000510737 TP53P04637 393 aaPredicted RBP11.12□□□□□ -0.63
USP53-206ENST00000510737 PLEKHN1Q494U1 663 aaPredicted RBP11.12□□□□□ -0.63
USP53-206ENST00000510737 UNC5AQ6ZN44 842 aa11.12□□□□□ -0.63
USP53-206ENST00000510737 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
USP53-206ENST00000510737 ZNF451Q9Y4E5 1061 aa11.12□□□□□ -0.63
USP53-206ENST00000510737 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
USP53-206ENST00000510737 OLFML2BQ68BL8 750 aa11.11□□□□□ -0.63
USP53-206ENST00000510737 CNKSR3Q6P9H4 555 aa11.11□□□□□ -0.63
USP53-206ENST00000510737 FERD3LQ96RJ6 166 aa11.11□□□□□ -0.63
USP53-206ENST00000510737 TM9SF2Q99805 663 aa11.11□□□□□ -0.63
USP53-206ENST00000510737 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
USP53-206ENST00000510737 FGD5Q6ZNL6 1462 aa11.11□□□□□ -0.63
USP53-206ENST00000510737 FGF10O15520 208 aaPredicted RBP11.1□□□□□ -0.63
USP53-206ENST00000510737 FOXD2O60548 495 aaPredicted RBP11.1□□□□□ -0.63
USP53-206ENST00000510737 IMPDH2P12268 514 aa11.1□□□□□ -0.63
USP53-206ENST00000510737 RBBP8NLQ8NC74 664 aaPredicted RBP11.1□□□□□ -0.63
USP53-206ENST00000510737 FEZF2Q8TBJ5 459 aa11.1□□□□□ -0.63
USP53-206ENST00000510737 CD247P20963 164 aa11.09□□□□□ -0.63
USP53-206ENST00000510737 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
USP53-206ENST00000510737 TP53I13Q8NBR0 393 aaPredicted RBP11.09□□□□□ -0.63
USP53-206ENST00000510737 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
USP53-206ENST00000510737 FCRL3Q96P31 734 aaPredicted RBP11.09□□□□□ -0.63
USP53-206ENST00000510737 KRTAP4-5Q9BYR2 181 aa11.09□□□□□ -0.63
USP53-206ENST00000510737 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
USP53-206ENST00000510737 IRS2Q9Y4H2 1338 aa11.09□□□□□ -0.63
USP53-206ENST00000510737 IGFBP6P24592 240 aaPredicted RBP11.08□□□□□ -0.64
USP53-206ENST00000510737 GUCY2CP25092 1073 aa11.08□□□□□ -0.64
USP53-206ENST00000510737 FIBCD1Q8N539 461 aa11.08□□□□□ -0.64
USP53-206ENST00000510737 NAT16Q8N8M0 369 aa11.08□□□□□ -0.64
USP53-206ENST00000510737 SMARCC1Q92922 1105 aaPredicted RBP11.08□□□□□ -0.64
USP53-206ENST00000510737 RTEL1Q9NZ71 1219 aa11.08□□□□□ -0.64
USP53-206ENST00000510737 FHOD1Q9Y613 1164 aa11.08□□□□□ -0.64
USP53-206ENST00000510737 CBFA2T2O43439 604 aa11.07□□□□□ -0.64
USP53-206ENST00000510737 BUB1BO60566 1050 aaPredicted RBP11.07□□□□□ -0.64
USP53-206ENST00000510737 IFNGR1P15260 489 aa11.07□□□□□ -0.64
USP53-206ENST00000510737 FBXW10Q5XX13 1052 aa11.07□□□□□ -0.64
USP53-206ENST00000510737 CWF19L1Q69YN2 538 aaKnown RBP11.07□□□□□ -0.64
USP53-206ENST00000510737 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
USP53-206ENST00000510737 FBLN1P23142 703 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 MAPKAPK2P49137 400 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 ZNF200P98182 395 aaPredicted RBP11.06□□□□□ -0.64
USP53-206ENST00000510737 NFIXQ14938 502 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 NOL9Q5SY16 702 aaKnown RBP11.06□□□□□ -0.64
USP53-206ENST00000510737 HLA-DQA1Q5Y7H0 255 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 CCDC81Q6ZN84 652 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 PWWP2AQ96N64 755 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 METTL5Q9NRN9 209 aaKnown RBP11.06□□□□□ -0.64
USP53-206ENST00000510737 ZNF214Q9UL59 606 aaPredicted RBP11.06□□□□□ -0.64
USP53-206ENST00000510737 NUP160Q12769 1436 aa11.06□□□□□ -0.64
USP53-206ENST00000510737 DBHP09172 617 aa11.05□□□□□ -0.64
USP53-206ENST00000510737 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
USP53-206ENST00000510737 MCMBPQ9BTE3 642 aa11.05□□□□□ -0.64
USP53-206ENST00000510737 NOL6Q9H6R4 1146 aaKnown RBP11.05□□□□□ -0.64
USP53-206ENST00000510737 GRIN2AQ12879 1464 aa11.05□□□□□ -0.64
USP53-206ENST00000510737 LIMS1P48059 325 aa11.04□□□□□ -0.64
USP53-206ENST00000510737 ZC3H14Q6PJT7 736 aaKnown RBP11.04□□□□□ -0.64
USP53-206ENST00000510737 ABCA5Q8WWZ7 1642 aa11.03□□□□□ -0.64
USP53-206ENST00000510737 JAMLQ86YT9 394 aa11.03□□□□□ -0.64
USP53-206ENST00000510737 ZDHHC14Q8IZN3 488 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms