RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 XKR9Q5GH70 373 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 KCTD16Q68DU8 428 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 NXNQ6DKJ4 435 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 CFAP61Q8NHU2 1237 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 GSDMBQ8TAX9 411 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 CUEDC2Q9H467 287 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 Q9H521 79 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 LARSQ9P2J5 1176 aaKnown RBP11.59□□□□□ -0.55
NEK1-206ENST00000510533 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
NEK1-206ENST00000510533 VGLL3A8MV65 326 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 OPHN1O60890 802 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 POLR2MP0CAP2 368 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
NEK1-206ENST00000510533 CUL4BQ13620 913 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 LRRC24Q50LG9 513 aa11.59□□□□□ -0.55
NEK1-206ENST00000510533 ZBTB38Q8NAP3 1195 aaPredicted RBP11.59□□□□□ -0.55
NEK1-206ENST00000510533 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
NEK1-206ENST00000510533 FOXP1Q9H334 677 aaPredicted RBP11.59□□□□□ -0.55
NEK1-206ENST00000510533 PHLPP2Q6ZVD8 1323 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 ENC1O14682 589 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 TNNC2P02585 160 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 BCAMP50895 628 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 GTF2IP78347 998 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 ARHGAP4P98171 946 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 NAA35Q5VZE5 725 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 TTC19Q6DKK2 380 aaPredicted RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 ARMCX5Q6P1M9 558 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 ZBTB8OSQ8IWT0 167 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 MRPL11Q9Y3B7 192 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 SUN1O94901 812 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 SEC31AO94979 1220 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 PDE6BP35913 854 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 TEKT3Q9BXF9 490 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 MIS12Q9H081 205 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEK1-206ENST00000510533 ZNF148Q9UQR1 794 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 CARMIL3Q8ND23 1372 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 RBL2Q08999 1139 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 LRRC47Q8N1G4 583 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 M0QZ92 97 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 LAD1O00515 517 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 PCCAP05165 728 aaPredicted RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 LMNB1P20700 586 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 POLR2BP30876 1174 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 NSFP46459 744 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 TRAPPC10P48553 1259 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 EPHB4P54760 987 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 AOC3Q16853 763 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 DPCR1Q3MIW9 517 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 ARHGEF16Q5VV41 709 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 OSBPL3Q9H4L5 887 aa11.58□□□□□ -0.56
NEK1-206ENST00000510533 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.56
NEK1-206ENST00000510533 LUC7L3O95232 432 aaKnown RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 SESN3P58005 492 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 PDE1CQ14123 709 aaPredicted RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 DBN1Q16643 649 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 C11orf57Q6ZUT1 292 aaPredicted RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 FBXO11Q86XK2 927 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 CCDC197Q8NCU1 140 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 COPRSQ9NQ92 184 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 DLATP10515 647 aaKnown RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 CNGA1P29973 690 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 PDZD4Q76G19 769 aaPredicted RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 RETREG2Q8NC44 543 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 CCDC127Q96BQ5 260 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 BICRAQ9NZM4 1560 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 IL9RQ01113 521 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 ZMYM1Q5SVZ6 1142 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 GJA10Q969M2 543 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 FMNL1O95466 1100 aaPredicted RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 GOLGA8FQ08AF8 430 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 GOLGA8DPQ0D2H9 430 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 PLA2G4DQ86XP0 818 aa11.57□□□□□ -0.56
NEK1-206ENST00000510533 NSUN7Q8NE18 718 aaKnown RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 CACTINQ8WUQ7 758 aaKnown RBP11.57□□□□□ -0.56
NEK1-206ENST00000510533 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 KIF11P52732 1056 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 RBBP5Q15291 538 aaKnown RBP11.56□□□□□ -0.56
NEK1-206ENST00000510533 CCDC93Q567U6 631 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 TTLL7Q6ZT98 887 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 SCYL1Q96KG9 808 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 RNF26Q9BY78 433 aaPredicted RBP11.56□□□□□ -0.56
NEK1-206ENST00000510533 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 MYL7Q01449 175 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 LMNB2Q03252 620 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
NEK1-206ENST00000510533 KAZNQ674X7 775 aa11.56□□□□□ -0.56
NEK1-206ENST00000510533 MAGOHBQ96A72 148 aaKnown RBP11.56□□□□□ -0.56
NEK1-206ENST00000510533 HVCN1Q96D96 273 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms