RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CYP19A1P11511 503 aaPredicted RBP6.35□□□□□ -1.39
NEK1-204ENST00000509912 NRLP54845 237 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 NLRP12P59046 1061 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 IKBKEQ14164 716 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 FIGNL1Q6PIW4 674 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 HHIPL1Q96JK4 782 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 PANK3Q9H999 370 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
NEK1-204ENST00000509912 DLG5Q8TDM6 1919 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 DDX3YO15523 660 aaKnown RBP6.34□□□□□ -1.39
NEK1-204ENST00000509912 HSPA6P17066 643 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 LIG1P18858 919 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 POU3F3P20264 500 aaPredicted RBP6.34□□□□□ -1.39
NEK1-204ENST00000509912 NME2P22392 152 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 PSAPL1Q6NUJ1 521 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 COL15A1P39059 1388 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 HOXA10P31260 410 aaPredicted RBP6.34□□□□□ -1.39
NEK1-204ENST00000509912 PRR20EP86478 221 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 PRR20CP86479 221 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 PRR20DP86480 221 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 PRR20BP86481 221 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 PRR20AP86496 221 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 ZNF252P-AS1Q0IIN9 211 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 ARSHQ5FYA8 562 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 FAM209AQ5JX71 171 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 LINC00116Q8NCU8 138 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 XAGE3Q8WTP9 111 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 CFAP53Q96M91 514 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 KLF15Q9UIH9 416 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 SOX13Q9UN79 622 aa6.34□□□□□ -1.39
NEK1-204ENST00000509912 COL11A2P13942 1736 aaPredicted RBP6.34□□□□□ -1.4
NEK1-204ENST00000509912 RTL9Q8NET4 1388 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 CHURC1-FNTBB4DL54 471 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
NEK1-204ENST00000509912 PDGFRBP09619 1106 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 PLCG1P19174 1290 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 LMOD3Q0VAK6 560 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 COL9A2Q14055 689 aaPredicted RBP6.33□□□□□ -1.4
NEK1-204ENST00000509912 MORC1Q86VD1 984 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 CCDC113Q9H0I3 377 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 NUDCQ9Y266 331 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 CARMIL3Q8ND23 1372 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 IL16Q14005 1332 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 NEURL1BA8MQ27 555 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 KATNA1O75449 491 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 GYS1P13807 737 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 TRIM28Q13263 835 aaKnown RBP6.33□□□□□ -1.4
NEK1-204ENST00000509912 LHFPL2Q6ZUX7 228 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 ZSCAN1Q8NBB4 408 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 CLUHP3Q96NS8 147 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 LPIN3Q9BQK8 851 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 BRIP1Q9BX63 1249 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 COL1A1P02452 1464 aaPredicted RBP6.33□□□□□ -1.4
NEK1-204ENST00000509912 LINC01387J3KSC0 135 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 ADCY3O60266 1144 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 PDE8AO60658 829 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 DLGAP3O95886 979 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 KCNA3P22001 575 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 ARNTP27540 789 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 RPS26P62854 115 aaKnown RBP6.33□□□□□ -1.4
NEK1-204ENST00000509912 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
NEK1-204ENST00000509912 SLC10A6Q3KNW5 377 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 C1orf141Q5JVX7 400 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 ELMSAN1Q6PJG2 1045 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 UNC5AQ6ZN44 842 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 EXOC2Q96KP1 924 aa6.33□□□□□ -1.4
NEK1-204ENST00000509912 CCDC86Q9H6F5 360 aaKnown RBP6.33□□□□□ -1.4
NEK1-204ENST00000509912 SLC35F4A4IF30 521 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
NEK1-204ENST00000509912 GSTP1P09211 210 aaKnown RBP6.32□□□□□ -1.4
NEK1-204ENST00000509912 GUCY2CP25092 1073 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 CNNM4Q6P4Q7 775 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 STRA8Q7Z7C7 330 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
NEK1-204ENST00000509912 FGD4Q96M96 766 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 RTFDC1Q9BY42 306 aaPredicted RBP6.32□□□□□ -1.4
NEK1-204ENST00000509912 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
NEK1-204ENST00000509912 ATP8A1Q9Y2Q0 1164 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 ZNF646O15015 1829 aaPredicted RBP6.32□□□□□ -1.4
NEK1-204ENST00000509912 RAG1P15918 1043 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 MAOBP27338 520 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 ITPK1Q13572 414 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 PDE3AQ14432 1141 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 CT47A1Q5JQC4 288 aaPredicted RBP6.32□□□□□ -1.4
NEK1-204ENST00000509912 AMIGO3Q86WK7 504 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 PLEKHF1Q96S99 279 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 APEX2Q9UBZ4 518 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 PGAP2Q9UHJ9 254 aa6.32□□□□□ -1.4
NEK1-204ENST00000509912 GNAT3A8MTJ3 354 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 STARD3NLO95772 234 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 ITGA6P23229 1130 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 SKOR2Q2VWA4 1001 aaPredicted RBP6.31□□□□□ -1.4
NEK1-204ENST00000509912 PPM1JQ5JR12 505 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 VWA5B2Q8N398 1253 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 ADCY4Q8NFM4 1077 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 THAP3Q8WTV1 239 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms