RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TIGD5Q53EQ6 642 aa10.33□□□□□ -0.76
TRAPPC11-206ENST00000509857 BTN2A2Q8WVV5 523 aa10.33□□□□□ -0.76
TRAPPC11-206ENST00000509857 A0A1W2PQ45 241 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 A0A1W2PQU0 124 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 A0A1W2PQY0 241 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 IQCA1LA6NCM1 817 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 C2orf71A6NGG8 1288 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 TRHRP34981 398 aaPredicted RBP10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 CEP128Q6ZU80 1094 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 NAT16Q8N8M0 369 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 FAM168AQ92567 244 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 SHISA4Q96DD7 197 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 DEPDC7Q96QD5 511 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 C19orf44Q9H6X5 657 aa10.32□□□□□ -0.76
TRAPPC11-206ENST00000509857 EFEMP2O95967 443 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 SCG5P05408 212 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 GLI1P08151 1106 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 RTP1P59025 263 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 CYP4F3Q08477 520 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 KCNMB1Q16558 191 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 NLRX1Q86UT6 975 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 PMFBP1Q8TBY8 1022 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 ASIC4Q96FT7 647 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 OSBPL2Q9H1P3 480 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 SNTG2Q9NY99 539 aa10.31□□□□□ -0.76
TRAPPC11-206ENST00000509857 HOXC12P31275 282 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 SEPHS1P49903 392 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 PPP2R2AP63151 447 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 SCRN1Q12765 414 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 HSF5Q4G112 596 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 HLA-DQA1Q5Y7H0 255 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 KSR1Q8IVT5 923 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 CCDC140Q96MF4 163 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 RNF32Q9H0A6 362 aa10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC11-206ENST00000509857 WTIPA6NIX2 430 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 PSPNO60542 156 aa10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 TBC1D8O95759 1140 aa10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 SLC14A2Q15849 920 aa10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 GALNT18Q6P9A2 607 aa10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 LRRC47Q8N1G4 583 aaKnown RBP10.29□□□□□ -0.76
TRAPPC11-206ENST00000509857 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 FAM221BA6H8Z2 402 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 GFRA1P56159 465 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 MTERF2Q49AM1 385 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 SPATC1Q76KD6 591 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 NPLOC4Q8TAT6 608 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 JMJD8Q96S16 334 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
TRAPPC11-206ENST00000509857 TRBV23OR9-2A0A075B6M9 112 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 ZNF503-AS2A6NEH8 195 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 CCDC85CA6NKD9 419 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 CRTAC1Q9NQ79 661 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 ARHGEF4Q9NR80 690 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 GPR160Q9UJ42 338 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 ACSL6Q9UKU0 697 aa10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 YBX2Q9Y2T7 364 aaKnown RBP10.27□□□□□ -0.77
TRAPPC11-206ENST00000509857 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 CPP00450 1065 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 THBDP07204 575 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 GRIA2P42262 883 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 HSP90AA2PQ14568 343 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 TESK1Q15569 626 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 FRS2Q8WU20 508 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 C1orf159Q96HA4 380 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 SRPK1Q96SB4 655 aaKnown RBP10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 AARSD1Q9BTE6 412 aaKnown RBP10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 SPATA9Q9BWV2 254 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 LNPKQ9C0E8 428 aa10.26□□□□□ -0.77
TRAPPC11-206ENST00000509857 ADCY3O60266 1144 aa10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 SNRPB2P08579 225 aaKnown RBP10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 PAMP19021 973 aa10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 CORO7P57737 925 aa10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 ACBD5Q5T8D3 534 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 NLGN2Q8NFZ4 835 aa10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 MMP19Q99542 508 aa10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
TRAPPC11-206ENST00000509857 FGFR1P11362 822 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 PLS3P13797 630 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 L1CAMP32004 1257 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 MAP4K2Q12851 820 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 IFRD2Q12894 506 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 SF1Q15637 639 aaKnown RBP10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 JAMLQ86YT9 394 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 KREMEN2Q8NCW0 462 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 GPRC5CQ9NQ84 441 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 CLEC1BQ9P126 229 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 IMPACTQ9P2X3 320 aa10.24□□□□□ -0.77
TRAPPC11-206ENST00000509857 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 DIAPH1O60610 1272 aaKnown RBP10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 PNLIPP16233 465 aa10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 RBM10P98175 930 aaKnown RBP10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 SLC35F1Q5T1Q4 408 aa10.23□□□□□ -0.77
TRAPPC11-206ENST00000509857 E4F1Q66K89 784 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms