RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 FAM161BQ96MY7 647 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 TOX2Q96NM4 488 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 TRERF1Q96PN7 1200 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
HMGCL-208ENST00000509389 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
HMGCL-208ENST00000509389 LAMA2P24043 3122 aaKnown RBP17.18■□□□□ 0.34
HMGCL-208ENST00000509389 LAMA4Q16363 1823 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 DCDC2CA8MYV0 355 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 HIP1O00291 1037 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 DLL1O00548 723 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 SGSM2O43147 1006 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 FGAP02671 866 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 ASGR1P07306 291 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 ALAS1P13196 640 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 EPHB4P54760 987 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 ZNF697Q5TEC3 545 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
HMGCL-208ENST00000509389 IL25Q9H293 177 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 SPC25Q9HBM1 224 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 ELP1O95163 1332 aa17.17■□□□□ 0.34
HMGCL-208ENST00000509389 MUM1L1Q5H9M0 696 aa17.16■□□□□ 0.34
HMGCL-208ENST00000509389 GLT1D1Q96MS3 346 aa17.16■□□□□ 0.34
HMGCL-208ENST00000509389 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
HMGCL-208ENST00000509389 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 ASB14A6NK59 587 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 CTAGE5O15320 804 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 CDK7P50613 346 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 MFAP1P55081 439 aaKnown RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 SMAD3P84022 425 aaKnown RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 FPGSQ05932 587 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 NMIQ13287 307 aaPredicted RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 CCDC96Q2M329 555 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 GNASQ5JWF2 1037 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 DCAF4Q8WV16 495 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 ASTN1O14525 1302 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 LCTP09848 1927 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 REC8O95072 547 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 NKX3-2P78367 333 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 TNFAIP2Q03169 654 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 RRP12Q5JTH9 1297 aaKnown RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 TTBK2Q6IQ55 1244 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 ZNF589Q86UQ0 364 aaPredicted RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 VTI1AQ96AJ9 217 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 CYP39A1Q9NYL5 469 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 CCPG1Q9ULG6 757 aa17.15■□□□□ 0.34
HMGCL-208ENST00000509389 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
HMGCL-208ENST00000509389 CUL9Q8IWT3 2517 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 A0A0U1RQG5 324 aaPredicted RBP17.14■□□□□ 0.33
HMGCL-208ENST00000509389 TIMP1P01033 207 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 ICAM1P05362 532 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
HMGCL-208ENST00000509389 SLC16A2P36021 539 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 BEX3Q00994 111 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 BTNL9Q6UXG8 535 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
HMGCL-208ENST00000509389 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
HMGCL-208ENST00000509389 SEMA6BQ9H3T3 888 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 TBX21Q9UL17 535 aa17.14■□□□□ 0.33
HMGCL-208ENST00000509389 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 MROH7Q68CQ1 1323 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 ARVCFO00192 962 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 HAND2P61296 217 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 NSMFQ6X4W1 530 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 NOL8Q76FK4 1167 aaKnown RBP17.13■□□□□ 0.33
HMGCL-208ENST00000509389 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
HMGCL-208ENST00000509389 GNEQ9Y223 722 aaKnown RBP17.13■□□□□ 0.33
HMGCL-208ENST00000509389 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 SMPD1P17405 629 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 PTGS1P23219 599 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 SYDE2Q5VT97 1194 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 TAPT1Q6NXT6 567 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 PURBQ96QR8 312 aaKnown RBP17.12■□□□□ 0.33
HMGCL-208ENST00000509389 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
HMGCL-208ENST00000509389 TTYH1Q9H313 450 aaPredicted RBP17.12■□□□□ 0.33
HMGCL-208ENST00000509389 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 PDGFCQ9NRA1 345 aa17.12■□□□□ 0.33
HMGCL-208ENST00000509389 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
HMGCL-208ENST00000509389 A0A0C4DFX4 3053 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 IQSEC1Q6DN90 963 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 CXCL17Q6UXB2 119 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 EEPD1Q7L9B9 569 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
HMGCL-208ENST00000509389 FAM126BQ8IXS8 530 aa17.11■□□□□ 0.33
HMGCL-208ENST00000509389 MORC4Q8TE76 937 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms