RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
RNF4-213ENST00000509388 FAM184AQ8NB25 1140 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 ZNF296Q8WUU4 475 aaPredicted RBP17.12■□□□□ 0.33
RNF4-213ENST00000509388 COA7Q96BR5 231 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 PORCNQ9H237 461 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
RNF4-213ENST00000509388 RIPK3Q9Y572 518 aa17.12■□□□□ 0.33
RNF4-213ENST00000509388 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
RNF4-213ENST00000509388 FOXN1O15353 648 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 FCER1AP12319 257 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 XBP1P17861 261 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 HOXD10P28358 340 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 NAPAP54920 295 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
RNF4-213ENST00000509388 MCF2L2Q86YR7 1114 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 ANKRD35Q8N283 1001 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
RNF4-213ENST00000509388 CD99L2Q8TCZ2 262 aa17.11■□□□□ 0.33
RNF4-213ENST00000509388 CCDC12Q8WUD4 166 aaPredicted RBP17.11■□□□□ 0.33
RNF4-213ENST00000509388 STRNO43815 780 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 JAK2O60674 1132 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
RNF4-213ENST00000509388 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
RNF4-213ENST00000509388 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 GPR142Q7Z601 462 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
RNF4-213ENST00000509388 MMP19Q99542 508 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 KIF3AQ9Y496 699 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
RNF4-213ENST00000509388 HSPA8P11142 646 aaKnown RBP17.09■□□□□ 0.33
RNF4-213ENST00000509388 ST3GAL1Q11201 340 aa17.09■□□□□ 0.33
RNF4-213ENST00000509388 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
RNF4-213ENST00000509388 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
RNF4-213ENST00000509388 DTNBO60941 627 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 CFBP00751 764 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 GNRH1P01148 92 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 PTPREP23469 700 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 ANP32AP39687 249 aaKnown RBP17.08■□□□□ 0.32
RNF4-213ENST00000509388 LBX1P52954 281 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 TRIM29Q14134 588 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 PKN1Q16512 942 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 PPP1R18Q6NYC8 613 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 DPP9Q86TI2 863 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 CUL5Q93034 780 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 ALG1Q9BT22 464 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 ARHGAP39Q9C0H5 1083 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 SLC5A4Q9NY91 659 aa17.08■□□□□ 0.32
RNF4-213ENST00000509388 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 SLC15A5A6NIM6 579 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 STXBP3O00186 592 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 NFIBO00712 420 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 MRPL12P52815 198 aaKnown RBP17.07■□□□□ 0.32
RNF4-213ENST00000509388 NLRP5P59047 1200 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 CUL4AQ13619 759 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 ABRAQ8N0Z2 381 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 SOCS4Q8WXH5 440 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 CLEC4DQ8WXI8 215 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 NUDT12Q9BQG2 462 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 GLT8D2Q9H1C3 349 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 PSTPIP2Q9H939 334 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 VPS54Q9P1Q0 977 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 RLFQ13129 1914 aa17.07■□□□□ 0.32
RNF4-213ENST00000509388 PFASO15067 1338 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 GCOM1H8Y6P7 765 aaPredicted RBP17.06■□□□□ 0.32
RNF4-213ENST00000509388 POLR2MP0CAP2 368 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 FDPSP14324 419 aaKnown RBP17.06■□□□□ 0.32
RNF4-213ENST00000509388 CALML3P27482 149 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 ADORA2AP29274 412 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 GNA11P29992 359 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 ADCY7P51828 1080 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 SAMD3Q8N6K7 520 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 INTS4Q96HW7 963 aaKnown RBP17.06■□□□□ 0.32
RNF4-213ENST00000509388 MAF1Q9H063 256 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 C6orf50Q9HD87 102 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 A1CFQ9NQ94 594 aaKnown RBP17.06■□□□□ 0.32
RNF4-213ENST00000509388 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
RNF4-213ENST00000509388 TRIM17Q9Y577 477 aa17.06■□□□□ 0.32
RNF4-213ENST00000509388 GJB2P29033 226 aa17.05■□□□□ 0.32
RNF4-213ENST00000509388 CTGFP29279 349 aa17.05■□□□□ 0.32
RNF4-213ENST00000509388 RGS2P41220 211 aa17.05■□□□□ 0.32
RNF4-213ENST00000509388 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
RNF4-213ENST00000509388 GRB14Q14449 540 aa17.05■□□□□ 0.32
RNF4-213ENST00000509388 AIFM3Q96NN9 605 aa17.05■□□□□ 0.32
RNF4-213ENST00000509388 MAP3K20Q9NYL2 800 aaKnown RBP17.05■□□□□ 0.32
RNF4-213ENST00000509388 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
RNF4-213ENST00000509388 A0A0G2JMZ2 1700 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 PGK2P07205 417 aa17.04■□□□□ 0.32
RNF4-213ENST00000509388 CYP2B6P20813 491 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms