RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 PNMA2Q9UL42 364 aa16.84■□□□□ 0.29
GABRB1-203ENST00000509366 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 SOWAHBA6NEL2 793 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 HIP1O00291 1037 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 ASGR1P07306 291 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 SDSP20132 328 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 NUCB1Q02818 461 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 C9orf50Q5SZB4 431 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 BTNL9Q6UXG8 535 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 RASGRP2Q7LDG7 609 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 ESR2Q92731 530 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 AP5M1Q9H0R1 490 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
GABRB1-203ENST00000509366 OSBPL3Q9H4L5 887 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 GPCPD1Q9NPB8 672 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 CYP39A1Q9NYL5 469 aa16.83■□□□□ 0.28
GABRB1-203ENST00000509366 ADD3Q9UEY8 706 aaKnown RBP16.83■□□□□ 0.28
GABRB1-203ENST00000509366 SLC16A2P36021 539 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 NT5C2P49902 561 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 FPGSQ05932 587 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 ZNF697Q5TEC3 545 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 TTBK2Q6IQ55 1244 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 PLEKHM2Q8IWE5 1019 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 KATNBL1Q9H079 304 aa16.82■□□□□ 0.28
GABRB1-203ENST00000509366 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
GABRB1-203ENST00000509366 A0A0U1RQG5 324 aaPredicted RBP16.81■□□□□ 0.28
GABRB1-203ENST00000509366 ZNF213O14771 459 aa16.81■□□□□ 0.28
GABRB1-203ENST00000509366 ADCY6O43306 1168 aa16.81■□□□□ 0.28
GABRB1-203ENST00000509366 FAAP100Q0VG06 881 aa16.81■□□□□ 0.28
GABRB1-203ENST00000509366 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
GABRB1-203ENST00000509366 COL6A3P12111 3177 aa16.81■□□□□ 0.28
GABRB1-203ENST00000509366 LAMA2P24043 3122 aaKnown RBP16.81■□□□□ 0.28
GABRB1-203ENST00000509366 TLR3O15455 904 aaKnown RBP16.8■□□□□ 0.28
GABRB1-203ENST00000509366 ZEB2O60315 1214 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 CABYRO75952 493 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 IGHDP01880 384 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 PDHBP11177 359 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 ITGB8P26012 769 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 NKX3-2P78367 333 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 SMAD3P84022 425 aaKnown RBP16.8■□□□□ 0.28
GABRB1-203ENST00000509366 ZNF543Q08ER8 600 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 IQSEC1Q6DN90 963 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 CWC27Q6UX04 472 aaKnown RBP16.8■□□□□ 0.28
GABRB1-203ENST00000509366 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 IQCA1Q86XH1 822 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 TBC1D10CQ8IV04 446 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 MPHOSPH6Q99547 160 aaKnown RBP16.8■□□□□ 0.28
GABRB1-203ENST00000509366 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
GABRB1-203ENST00000509366 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.79■□□□□ 0.28
GABRB1-203ENST00000509366 ARVCFO00192 962 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 TIMP1P01033 207 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 CDK7P50613 346 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 IRX5P78411 483 aaPredicted RBP16.79■□□□□ 0.28
GABRB1-203ENST00000509366 BEX3Q00994 111 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 BAATQ14032 418 aaPredicted RBP16.79■□□□□ 0.28
GABRB1-203ENST00000509366 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
GABRB1-203ENST00000509366 FSCN1Q16658 493 aaKnown RBP16.79■□□□□ 0.28
GABRB1-203ENST00000509366 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
GABRB1-203ENST00000509366 EEPD1Q7L9B9 569 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
GABRB1-203ENST00000509366 ASTN1O14525 1302 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 PTPDC1A2A3K4 754 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 NFIBO00712 420 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
GABRB1-203ENST00000509366 DGKHQ86XP1 1220 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 FBXO16Q8IX29 292 aaPredicted RBP16.78■□□□□ 0.28
GABRB1-203ENST00000509366 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 SEZ6LQ9BYH1 1024 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
GABRB1-203ENST00000509366 Q9Y3F1 56 aa16.78■□□□□ 0.28
GABRB1-203ENST00000509366 NEDD4P46934 1319 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 WDR19Q8NEZ3 1342 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 CTAGE5O15320 804 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 SNHG28P0DPA3 235 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 SMPD1P17405 629 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 EPHB4P54760 987 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.28
GABRB1-203ENST00000509366 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.28
GABRB1-203ENST00000509366 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 CXCL17Q6UXB2 119 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 RNF207Q6ZRF8 634 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 MORC4Q8TE76 937 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 PDGFCQ9NRA1 345 aa16.77■□□□□ 0.28
GABRB1-203ENST00000509366 B4DLN1 442 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 KDM4AO75164 1064 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 CALML3P27482 149 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 ALDH5A1P51649 535 aaPredicted RBP16.76■□□□□ 0.27
GABRB1-203ENST00000509366 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
GABRB1-203ENST00000509366 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 TMEM199Q8N511 208 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 GUCD1Q96NT3 240 aa16.76■□□□□ 0.27
GABRB1-203ENST00000509366 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms