RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 CNNM3Q8NE01 707 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 TMEM47Q9BQJ4 181 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 IDI2Q9BXS1 227 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 VPS33BQ9H267 617 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 DNAJC18Q9H819 358 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 KAT14Q9H8E8 782 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 ECM29Q5VYK3 1845 aa12.62□□□□□ -0.39
COPS4-206ENST00000509093 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 CCDC196A0A1B0GTZ2 297 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 TUBBP07437 444 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
COPS4-206ENST00000509093 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 CCDC91Q7Z6B0 441 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 TADA2BQ86TJ2 420 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 CEP95Q96GE4 821 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 FAM107BQ9H098 131 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 SERPINB13Q9UIV8 391 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 CDC23Q9UJX2 597 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 STX8Q9UNK0 236 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 STK36Q9NRP7 1315 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 PSME4Q14997 1843 aa12.61□□□□□ -0.39
COPS4-206ENST00000509093 A0A087WUV0 522 aaPredicted RBP12.6□□□□□ -0.39
COPS4-206ENST00000509093 SPDYE2BA6NHP3 402 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 SPDYE6P0CI01 402 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
COPS4-206ENST00000509093 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
COPS4-206ENST00000509093 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 KCNJ14Q9UNX9 436 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 V9GY48 417 aaPredicted RBP12.6□□□□□ -0.39
COPS4-206ENST00000509093 CCDC175P0C221 793 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 CALM1P0DP23 149 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 CALM2P0DP24 149 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 CALM3P0DP25 149 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 EIF6P56537 245 aaKnown RBP12.6□□□□□ -0.39
COPS4-206ENST00000509093 CASP8Q14790 479 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 PKN1Q16512 942 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
COPS4-206ENST00000509093 MRPL44Q9H9J2 332 aaKnown RBP12.6□□□□□ -0.39
COPS4-206ENST00000509093 TCP10L2B9ZVM9 353 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 SPECC1LQ69YQ0 1117 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 ISM2Q6H9L7 571 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 ZSCAN29Q8IWY8 852 aaPredicted RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 TRIM22Q8IYM9 498 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 PDILTQ8N807 584 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 RBM28Q9NW13 759 aaKnown RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 FANCLQ9NW38 375 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 MYO3BQ8WXR4 1341 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 SIPA1L1O43166 1804 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 DESI2Q9BSY9 194 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 FAM204AQ9H8W3 233 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 ZNF70Q9UC06 446 aaPredicted RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 PUF60Q9UHX1 559 aaKnown RBP12.59□□□□□ -0.39
COPS4-206ENST00000509093 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 CNTNAP5Q8WYK1 1306 aa12.59□□□□□ -0.39
COPS4-206ENST00000509093 DEXIO95424 95 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 SYKP43405 635 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 GSCP56915 257 aaPredicted RBP12.58□□□□□ -0.4
COPS4-206ENST00000509093 ANO1Q5XXA6 986 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 RNF26Q9BY78 433 aaPredicted RBP12.58□□□□□ -0.4
COPS4-206ENST00000509093 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 SUGCTQ9HAC7 445 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 SCAF8Q9UPN6 1271 aaKnown RBP12.58□□□□□ -0.4
COPS4-206ENST00000509093 HPSEQ9Y251 543 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
COPS4-206ENST00000509093 KIF5CO60282 957 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 EGFRP00533 1210 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 VSNL1P62760 191 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 GRM4Q14833 912 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 PPP2R5BQ15173 497 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 PTPN21Q16825 1174 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 CCDC178Q5BJE1 867 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 OGFOD1Q8N543 542 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 AGBL3Q8NEM8 1001 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 AFAP1L1Q8TED9 768 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 EHD4Q9H223 541 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 VIPAS39Q9H9C1 493 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 MTMR4Q9NYA4 1195 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 SWAP70Q9UH65 585 aa12.58□□□□□ -0.4
COPS4-206ENST00000509093 HDAC9Q9UKV0 1011 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms