RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 MICU3Q86XE3 530 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 ERO1BQ86YB8 467 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 SPICE1Q8N0Z3 855 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 STAG2Q8N3U4 1231 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 NME8Q8N427 588 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 NECAB1Q8N987 351 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 ZNF280CQ8ND82 737 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 SLC10A4Q96EP9 437 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 NUP88Q99567 741 aaPredicted RBP9.55□□□□□ -0.88
SSBP2-212ENST00000509053 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 WDR18Q9BV38 432 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 TBC1D2Q9BYX2 928 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 NCOA5Q9HCD5 579 aaKnown RBP9.55□□□□□ -0.88
SSBP2-212ENST00000509053 ARHGEF10LQ9HCE6 1279 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 FAM217BQ9NTX9 383 aaPredicted RBP9.55□□□□□ -0.88
SSBP2-212ENST00000509053 BAZ2BQ9UIF8 2168 aaKnown RBP9.55□□□□□ -0.88
SSBP2-212ENST00000509053 RLFQ13129 1914 aa9.55□□□□□ -0.88
SSBP2-212ENST00000509053 GOLGA8BA8MQT2 603 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 USP17L10C9JJH3 530 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 F5H6K3 240 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 PEX14O75381 377 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 NDUFB10O96000 172 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 GOLGA8HP0CJ92 632 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 SNHG28P0DPA3 235 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 PDHBP11177 359 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 HMGCS2P54868 508 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 BACE1P56817 501 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 HTRA3P83110 453 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 PPATQ06203 517 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 KLRC3Q07444 240 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 SCRN1Q12765 414 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 SLC35G1Q2M3R5 365 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 FOXD4L6Q3SYB3 417 aaPredicted RBP9.54□□□□□ -0.88
SSBP2-212ENST00000509053 HS1BP3Q53T59 392 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 USP17L2Q6R6M4 530 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 FOXD4L3Q6VB84 417 aaPredicted RBP9.54□□□□□ -0.88
SSBP2-212ENST00000509053 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 CMTR1Q8N1G2 835 aaKnown RBP9.54□□□□□ -0.88
SSBP2-212ENST00000509053 NUP133Q8WUM0 1156 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 SNX21Q969T3 373 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 WNK4Q96J92 1243 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 TMX3Q96JJ7 454 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 CPVLQ9H3G5 476 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 VCPKMTQ9H867 229 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 MAD2L2Q9UI95 211 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.54□□□□□ -0.88
SSBP2-212ENST00000509053 LIMCH1Q9UPQ0 1083 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 TMA7Q9Y2S6 64 aaKnown RBP9.54□□□□□ -0.88
SSBP2-212ENST00000509053 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
SSBP2-212ENST00000509053 FRMPD2Q68DX3 1309 aaPredicted RBP9.53□□□□□ -0.88
SSBP2-212ENST00000509053 FSD2A1L4K1 749 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 ZBTB43O43298 467 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 PFKFB2O60825 505 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 PPFIA3O75145 1194 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 PLEKHA8P1O95397 391 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
SSBP2-212ENST00000509053 SLC4A3P48751 1232 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 PPIL2Q13356 520 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 MOGSQ13724 837 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 SLFN13Q68D06 897 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 TTBK2Q6IQ55 1244 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 KCTD1Q719H9 257 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 GMCL1P1Q8NEA9 526 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 WNT2BQ93097 391 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
SSBP2-212ENST00000509053 FAM210AQ96ND0 272 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 FEZ1Q99689 392 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 KIAA1683Q9H0B3 1180 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
SSBP2-212ENST00000509053 KCNH4Q9UQ05 1017 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 MYH6P13533 1939 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 NID2Q14112 1375 aa9.53□□□□□ -0.88
SSBP2-212ENST00000509053 COL11A1P12107 1806 aaPredicted RBP9.53□□□□□ -0.88
SSBP2-212ENST00000509053 A0A0G2JLL6 359 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 GOLGA8AA7E2F4 631 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 FAM155AB1AL88 458 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 DDAH1O94760 285 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 CTDNEP1O95476 244 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 METAP2P50579 478 aaKnown RBP eCLIP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 APLP1P51693 650 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 ZNF157P51786 506 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 GRM4Q14833 912 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 FAM83BQ5T0W9 1011 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 TREML2Q5T2D2 321 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 SPRYD7Q5W111 196 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 RGMBQ6NW40 437 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 PRRT2Q7Z6L0 340 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 FANCBQ8NB91 859 aa9.52□□□□□ -0.88
SSBP2-212ENST00000509053 PROCA1Q8NCQ7 364 aaPredicted RBP9.52□□□□□ -0.88
SSBP2-212ENST00000509053 ZIC5Q96T25 663 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms