RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CLCQ05315 142 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 NR1I3Q14994 352 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 TARBP2Q15633 366 aaKnown RBP4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 CPZQ66K79 652 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 TMEM192Q8IY95 271 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 C8orf49Q96NF6 230 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 SORCS2Q96PQ0 1159 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 RBM15Q96T37 977 aaKnown RBP eCLIP4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 LNPKQ9C0E8 428 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 ANTXR1Q9H6X2 564 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 GFOD1Q9NXC2 390 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 UBP1Q9NZI7 540 aa4.16□□□□□ -1.74
DEPDC1B-204ENST00000509006 GJA9P57773 515 aa4.15□□□□□ -1.75
DEPDC1B-204ENST00000509006 MRPL58Q14197 206 aaKnown RBP4.15□□□□□ -1.75
DEPDC1B-204ENST00000509006 CARFQ8N187 725 aa4.15□□□□□ -1.75
DEPDC1B-204ENST00000509006 FAN1Q9Y2M0 1017 aa4.15□□□□□ -1.75
DEPDC1B-204ENST00000509006 A0A1W2PQ27 194 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 A0A1W2PQ64 194 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 A0A1W2PQC6 194 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 A0A1W2PQD8 194 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 C1QTNF3-AMACRE9PGA6 284 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 SHOXO15266 292 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 SRGAP3O43295 1099 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 CYBBP04839 570 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 C6P13671 934 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 VAV1P15498 845 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 ENDOUP21128 410 aaKnown RBP4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 ITGAEP38570 1179 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 HMGA2P52926 109 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 SEZ6Q53EL9 994 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 RTP2Q5QGT7 225 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 PAQR3Q6TCH7 311 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 GK5Q6ZS86 529 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 SLITRK4Q8IW52 837 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 LOXL4Q96JB6 756 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 SLC6A18Q96N87 628 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 MKRN2Q9H000 416 aaKnown RBP4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 PRR13Q9NZ81 148 aa4.14□□□□□ -1.75
DEPDC1B-204ENST00000509006 SLPIP03973 132 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 ACRP10323 421 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 TACR1P25103 407 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 PRR5P85299 388 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 AUHQ13825 339 aaKnown RBP4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 LDLRAD1Q5T700 205 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 BICRALQ6AI39 1079 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 NAT16Q8N8M0 369 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 MENTQ9BUN1 341 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 NT5C1AQ9BXI3 368 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 C1QTNF3Q9BXJ4 246 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 RNF38Q9H0F5 515 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 BCAS3Q9H6U6 928 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 GGT7Q9UJ14 662 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 PCDHB12Q9Y5F1 795 aa4.13□□□□□ -1.75
DEPDC1B-204ENST00000509006 C9IYK1 514 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 F8W031 263 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 ASGR2P07307 311 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 TACR2P21452 398 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 APOBRQ0VD83 1088 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 CCDC27Q2M243 656 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 LRRFIP1Q32MZ4 808 aaKnown RBP4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 INTS3Q68E01 1043 aaKnown RBP4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 HS2ST1Q7LGA3 356 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 ZNF761Q86XN6 746 aaPredicted RBP4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 ZFPM1Q8IX07 1006 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 Q8N1X5 172 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 MRIQ9BWK5 157 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 FBXL21Q9UKT6 434 aa4.12□□□□□ -1.75
DEPDC1B-204ENST00000509006 A0A1W2PQJ5 194 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 GSTM1P09488 218 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 NCAM1P13591 858 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 PDIA4P13667 645 aaKnown RBP4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 GDF5P43026 501 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 ZNF165P49910 485 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 SPRED1Q7Z699 444 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 B3GNT8Q7Z7M8 397 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 JAMLQ86YT9 394 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 TTC9BQ8N6N2 239 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 NKD1Q969G9 470 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 SAMD11Q96NU1 681 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 NOX5Q96PH1 765 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 SRRTQ9BXP5 876 aaKnown RBP4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 RXFP1Q9HBX9 757 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 SUCOQ9UBS9 1254 aaKnown RBP4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 ZNRF3Q9ULT6 936 aa4.11□□□□□ -1.75
DEPDC1B-204ENST00000509006 PLATP00750 562 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 GSNP06396 782 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 PMLP29590 882 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 MCM4P33991 863 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 SARSP49591 514 aaKnown RBP4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 TBC1D10BQ4KMP7 808 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 HLA-DQA1Q5Y7H0 255 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 PPFIBP1Q86W92 1011 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 C7orf61Q8IZ16 206 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 TAB3Q8N5C8 712 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 SH3RF3Q8TEJ3 882 aaPredicted RBP4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 ALG3Q92685 438 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 DSCC1Q9BVC3 393 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 SLC12A9Q9BXP2 914 aa4.1□□□□□ -1.75
DEPDC1B-204ENST00000509006 PDLIM7Q9NR12 457 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms