RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 KCNA10Q16322 511 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 GNASQ5JWF2 1037 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 C1orf53Q5VUE5 145 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 GLT1D1Q96MS3 346 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 CTNNA3Q9UI47 895 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 ZNF536O15090 1300 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 SYNRGQ9UMZ2 1314 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 ADAMTS4O75173 837 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 ICAM1P05362 532 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 CLTBP09497 229 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 RAG1P15918 1043 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 NOVP48745 357 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 NT5C2P49902 561 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 TNFAIP2Q03169 654 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 IMMTQ16891 758 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 BTNL9Q6UXG8 535 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 RASGRP2Q7LDG7 609 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 IQCA1Q86XH1 822 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 DEFB123Q8N688 67 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 BADQ92934 168 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 TMEM39AQ9NV64 488 aa11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 ADD3Q9UEY8 706 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-227ENST00000508818 PTPDC1A2A3K4 754 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 GJA9P57773 515 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 DGKHQ86XP1 1220 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 TBC1D10CQ8IV04 446 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 KLHDC9Q8NEP7 349 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 MPHOSPH6Q99547 160 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 RANBP17Q9H2T7 1088 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 KAT14Q9H8E8 782 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 PDLIM7Q9NR12 457 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
UBE2D3-227ENST00000508818 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 ZEB2O60315 1214 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 KDM4AO75164 1064 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 ASGR1P07306 291 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 PDHBP11177 359 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 ZNF543Q08ER8 600 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 IQSEC1Q6DN90 963 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 EEPD1Q7L9B9 569 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 FGD4Q96M96 766 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 TOX2Q96NM4 488 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 KRT23Q9C075 422 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 ELP1O95163 1332 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.52
UBE2D3-227ENST00000508818 A0A0U1RQG5 324 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 B4DLN1 442 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 KIAA0355O15063 1070 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 TLR3O15455 904 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 DHX16O60231 1041 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 CALML3P27482 149 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 CST5P28325 142 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 MRPL12P52815 198 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 SHHQ15465 462 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 RNF207Q6ZRF8 634 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 KIAA1211Q6ZU35 1233 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 Q7L0L9 218 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 ANKRD33Q7Z3H0 272 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 RUFY2Q8WXA3 655 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 ZSCAN10Q96SZ4 725 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 UBAC1Q9BSL1 405 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 CNNM2Q9H8M5 875 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 NEDD4P46934 1319 aa11.82□□□□□ -0.52
UBE2D3-227ENST00000508818 B4E1Z4 1266 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 ARVCFO00192 962 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 CABYRO75952 493 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 GOLGA8HP0CJ92 632 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 IRX6P78412 446 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 BEX3Q00994 111 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 FPGSQ05932 587 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 PDE4DQ08499 809 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 TRDNQ13061 729 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 CCSAPQ6IQ19 270 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 TLK2Q86UE8 772 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 FBXO16Q8IX29 292 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 PNMA1Q8ND90 353 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 KATNBL1Q9H079 304 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 ZSWIM5Q9P217 1185 aa11.81□□□□□ -0.52
UBE2D3-227ENST00000508818 LOC102724159A0A0B4J2E5 919 aa11.8□□□□□ -0.52
UBE2D3-227ENST00000508818 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms