RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 TDHQ8IZJ6 230 aa10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 GLMNQ92990 594 aa10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 ZSCAN10Q96SZ4 725 aaPredicted RBP10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 NOL10Q9BSC4 688 aaKnown RBP10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 PORCNQ9H237 461 aa10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 PALD1Q9ULE6 856 aa10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 FLT1P17948 1338 aa10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
COL4A3BP-206ENST00000508809 MYH1P12882 1939 aa10.52□□□□□ -0.72
COL4A3BP-206ENST00000508809 RHOQP17081 205 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 SYN1P17600 705 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 RGS2P41220 211 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 NCOA4Q13772 614 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 SHROOM1Q2M3G4 852 aaPredicted RBP10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 ATF7IPQ6VMQ6 1270 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 TAS1R3Q7RTX0 852 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 GPR142Q7Z601 462 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 MAPKAPK5Q8IW41 473 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 DEFB123Q8N688 67 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 CALR3Q96L12 384 aaKnown RBP10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 MTMR10Q9NXD2 777 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 ZBTB21Q9ULJ3 1066 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 CDH23Q9H251 3354 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 PRUNE2Q8WUY3 3088 aa10.52□□□□□ -0.73
COL4A3BP-206ENST00000508809 GDF11O95390 407 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 IL2RAP01589 272 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 ATP8B2P98198 1209 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 INSM1Q01101 510 aaPredicted RBP10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 CENPCQ03188 943 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 PDE3AQ14432 1141 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 CCL14Q16627 93 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 TNNI3KQ59H18 835 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 WDR44Q5JSH3 913 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 LCE2AQ5TA79 106 aaPredicted RBP10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 TMEM214Q6NUQ4 689 aaKnown RBP10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 TATDN1Q6P1N9 297 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 CRACR2BQ8N4Y2 399 aaPredicted RBP10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 ADAMTS19Q8TE59 1207 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 SSH3Q8TE77 659 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 DBNDD2Q9BQY9 259 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 GRIP2Q9C0E4 1043 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 STXBP5LQ9Y2K9 1186 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 FPGT-TNNI3KV9GXZ4 949 aa10.51□□□□□ -0.73
COL4A3BP-206ENST00000508809 MAST2Q6P0Q8 1798 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L15C9J2P7 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L13C9JLJ4 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L11C9JVI0 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 WIPF1O43516 503 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 ATP9BO43861 1147 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 CNMDO75829 334 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 IGHA2P01877 340 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 HLA-DOAP06340 250 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 VSIG8P0DPA2 414 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 CCND3P30281 292 aaPredicted RBP10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 GDF10P55107 478 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 TLR1Q15399 786 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 LBX2Q6XYB7 198 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 Q7L0L9 218 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 EDC3Q96F86 508 aaKnown RBP10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 APBA2Q99767 749 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 UBE2OQ9C0C9 1292 aaKnown RBP10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 TNNQ9UQP3 1299 aa10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 NOP58Q9Y2X3 529 aaKnown RBP10.5□□□□□ -0.73
COL4A3BP-206ENST00000508809 FRMPD3Q5JV73 1810 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 CDC14CA4D256 554 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 BCAR3O75815 825 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 GH2P01242 217 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 HOXC6P09630 235 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 ZAP70P43403 619 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 ATP1A2P50993 1020 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 DYNLL1P63167 89 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 POU4F2Q12837 409 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 FAM109BQ6ICB4 259 aaPredicted RBP10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 TMED8Q6PL24 325 aaPredicted RBP10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 CERS3Q8IU89 383 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 PLEKHM2Q8IWE5 1019 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 CCAR1Q8IX12 1150 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 PAGR1Q9BTK6 254 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 EHD4Q9H223 541 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 ETNK1Q9HBU6 452 aa10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 PIH1D3Q9NQM4 214 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 SAP30BPQ9UHR5 308 aaKnown RBP10.49□□□□□ -0.73
COL4A3BP-206ENST00000508809 SPTBN5Q9NRC6 3674 aaKnown RBP10.48□□□□□ -0.73
COL4A3BP-206ENST00000508809 SLC15A5A6NIM6 579 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms