RNA–Protein interactions for RNA: ENST00000508735.5

SNHG4-206, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 310 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-206ENST00000508735 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 PTGS1P23219 599 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 HAND2P61296 217 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 NKX3-2P78367 333 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 SMAD3P84022 425 aaKnown RBP14.42□□□□□ -0.1
SNHG4-206ENST00000508735 BEX3Q00994 111 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 TNFAIP2Q03169 654 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 FPGSQ05932 587 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 RNPC3Q96LT9 517 aaKnown RBP14.42□□□□□ -0.1
SNHG4-206ENST00000508735 PURBQ96QR8 312 aaKnown RBP14.42□□□□□ -0.1
SNHG4-206ENST00000508735 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
SNHG4-206ENST00000508735 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 CYP39A1Q9NYL5 469 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 TBX21Q9UL17 535 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 LCTP09848 1927 aa14.42□□□□□ -0.1
SNHG4-206ENST00000508735 ZMYM6O95789 1325 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 ARVCFO00192 962 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 TIMP1P01033 207 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 ICAM1P05362 532 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 TOP1P11387 765 aaKnown RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 TMEM63BQ5T3F8 832 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 NSMFQ6X4W1 530 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 TTYH1Q9H313 450 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 PDGFCQ9NRA1 345 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 MROH7Q68CQ1 1323 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-206ENST00000508735 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
SNHG4-206ENST00000508735 SMPD1P17405 629 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 SMC5Q8IY18 1101 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 GPCPD1Q9NPB8 672 aa14.4□□□□□ -0.1
SNHG4-206ENST00000508735 NFIBO00712 420 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 IGHDP01880 384 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
SNHG4-206ENST00000508735 AKNAD1Q5T1N1 836 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 C16orf59Q7L2K0 433 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
SNHG4-206ENST00000508735 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNHG4-206ENST00000508735 CDH23Q9H251 3354 aa14.39□□□□□ -0.11
SNHG4-206ENST00000508735 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-206ENST00000508735 PDHBP11177 359 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 SDSP20132 328 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-206ENST00000508735 IQSEC1Q6DN90 963 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 MFSD6Q6ZSS7 791 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
SNHG4-206ENST00000508735 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-206ENST00000508735 NEDD4P46934 1319 aa14.38□□□□□ -0.11
SNHG4-206ENST00000508735 CD4P01730 458 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 SNHG28P0DPA3 235 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 CSF2RAP15509 400 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 ALDH5A1P51649 535 aaPredicted RBP14.37□□□□□ -0.11
SNHG4-206ENST00000508735 NUCB1Q02818 461 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 AAMPQ13685 434 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 CLEC4DQ8WXI8 215 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 TTC14Q96N46 770 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 ZKSCAN3Q9BRR0 538 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 GRIN2DO15399 1336 aa14.37□□□□□ -0.11
SNHG4-206ENST00000508735 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.36□□□□□ -0.11
SNHG4-206ENST00000508735 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.36□□□□□ -0.11
SNHG4-206ENST00000508735 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
SNHG4-206ENST00000508735 CABYRO75952 493 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 ACRP10323 421 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
SNHG4-206ENST00000508735 PPIGQ13427 754 aaKnown RBP eCLIP14.36□□□□□ -0.119e-10■□□□□ 10.7
SNHG4-206ENST00000508735 ITGA7Q13683 1181 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 TMEM240Q5SV17 173 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 SLC30A10Q6XR72 485 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.36□□□□□ -0.118e-76■■■■□ 24.7
SNHG4-206ENST00000508735 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
SNHG4-206ENST00000508735 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms