RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FCGRTP55899 365 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 C19orf57Q0VDD7 668 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 RABL6Q3YEC7 729 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 CCDC152Q4G0S7 254 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 STYK1Q6J9G0 422 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 PRPF40BQ6NWY9 871 aaKnown RBP6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 UBE3BQ7Z3V4 1068 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 TMC4Q7Z404 712 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 TXNRD3Q86VQ6 643 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 MAP4K3Q8IVH8 894 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 KLHL23Q8NBE8 558 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 PANK1Q8TE04 598 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 MASTLQ96GX5 879 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 CRAMP1Q96RY5 1269 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 NRSN2Q9GZP1 204 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 CLEC4MQ9H2X3 399 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 RTL9Q8NET4 1388 aa6.82□□□□□ -1.32
HMGB1P44-201ENST00000508597 ANKRD31Q8N7Z5 1873 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 NBPF7P0C2Y1 421 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 SRGNP10124 158 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 RLBP1P12271 317 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 CTSWP56202 376 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 GSTM4Q03013 218 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 MTX1Q13505 466 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 MRPL58Q14197 206 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 FAM117BQ6P1L5 589 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 ACAD11Q709F0 780 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 DDX46Q7L014 1031 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 TMEM130Q8N3G9 435 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 RBM17Q96I25 401 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 CDC5LQ99459 802 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 AKTIPQ9H8T0 292 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 SRA1Q9HD15 236 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 OSGEPQ9NPF4 335 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 DDX60Q8IY21 1712 aaKnown RBP6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 ABCC12Q96J65 1359 aa6.81□□□□□ -1.32
HMGB1P44-201ENST00000508597 DLEC1Q9Y238 1755 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 BBOX1O75936 387 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 HCLS1P14317 486 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 DAB2P98082 770 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 DUOXA2Q1HG44 320 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 RSPO4Q2I0M5 234 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 NKAPLQ5M9Q1 402 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 SOGA3Q5TF21 947 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 C2CD5Q86YS7 1000 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 RPAP2Q8IXW5 612 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 RPGRQ92834 1020 aaKnown RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 WNT8BQ93098 351 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 FRMD6Q96NE9 622 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 MEIS3Q99687 375 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 DUSP9Q99956 384 aaKnown RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 SYT17Q9BSW7 474 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 TMX4Q9H1E5 349 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 ZBTB40Q9NUA8 1239 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 PIM2Q9P1W9 311 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 TNNQ9UQP3 1299 aa6.8□□□□□ -1.32
HMGB1P44-201ENST00000508597 LOC100289279A0A1B0GTE1 492 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 ANKRD18BA2A2Z9 1011 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 HMMRO75330 724 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 FOXO4P98177 505 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 ATP8B2P98198 1209 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 IFIT5Q13325 482 aaKnown RBP6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 GRAPQ13588 217 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 CCDC57Q2TAC2 916 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 ERICH6BQ5W0A0 696 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 LMBR1LQ6UX01 489 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 SYNE4Q8N205 404 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 TTLL6Q8N841 843 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 GRAPLQ8TC17 118 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 STK35Q8TDR2 534 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 KAZALD1Q96I82 304 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 SUCLG2Q96I99 432 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 IGSF5Q9NSI5 407 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 PARP2Q9UGN5 583 aa6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 LRRFIP2Q9Y608 721 aaKnown RBP6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 BRCA1P38398 1863 aaKnown RBP6.79□□□□□ -1.32
HMGB1P44-201ENST00000508597 SRCAPQ6ZRS2 3230 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 RECKO95980 971 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 B3GALT4O96024 378 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 DPEP1P16444 411 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 GNA15P30679 374 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 RPS8P62241 208 aaKnown RBP6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 DALRD3Q5D0E6 543 aaKnown RBP6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 C20orf194Q5TEA3 1177 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 Q6ZS46 218 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 ANKRD18AQ8IVF6 992 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 ANKRD44Q8N8A2 993 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 ZNF622Q969S3 477 aaKnown RBP eCLIP6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 TP53INP1Q96A56 240 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 FAM161BQ96MY7 647 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 BICC1Q9H694 974 aaKnown RBP6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 BSDC1Q9NW68 430 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 KIAA1551Q9HCM1 1747 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms