RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TMC3Q7Z5M5 1100 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 GOLM1Q8NBJ4 401 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 DAGLBQ8NCG7 672 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 FBXO27Q8NI29 283 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 PNISRQ8TF01 805 aaKnown RBP5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 DACT3Q96B18 629 aaPredicted RBP5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 MRFAP1L1Q96HT8 127 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 MAP6Q96JE9 813 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 RNPC3Q96LT9 517 aaKnown RBP5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 TMEM74Q96NL1 305 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 HDAC8Q9BY41 377 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 INPP5FQ9Y2H2 1132 aa5.61□□□□□ -1.51
SMARCA5-202ENST00000508573 CCDC189A1A4V9 331 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 SLC22A31A6NKX4 558 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 N4BP3O15049 544 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 SORBS3O60504 671 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 SYPP08247 313 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 FGRP09769 529 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 PNLIPP16233 465 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 RACK1P63244 317 aaKnown RBP5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 NFE2L2Q16236 605 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 MAP9Q49MG5 647 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 ARSHQ5FYA8 562 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 ZNF655Q8N720 491 aaPredicted RBP5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 FEZF2Q8TBJ5 459 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 HHIPL1Q96JK4 782 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 IER2Q9BTL4 223 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 RSRP1Q9BUV0 290 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 XYLT2Q9H1B5 865 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 GEMIN8Q9NWZ8 242 aaKnown RBP5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 JAG2Q9Y219 1238 aa5.6□□□□□ -1.51
SMARCA5-202ENST00000508573 TLR3O15455 904 aaKnown RBP5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 RAG1P15918 1043 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 MCCP23508 829 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 RTP1P59025 263 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 SNW1Q13573 536 aaKnown RBP5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 KIR3DS1Q14943 382 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 NBPF9Q3BBW0 867 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 PLEKHG4Q58EX7 1191 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 CNKSR3Q6P9H4 555 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 LINC00116Q8NCU8 138 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 C8orf48Q96LL4 319 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 EPB41L4AQ9HCS5 686 aaPredicted RBP5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 MRS2Q9HD23 443 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 VTI1BQ9UEU0 232 aa5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 DDX41Q9UJV9 622 aaKnown RBP5.59□□□□□ -1.51
SMARCA5-202ENST00000508573 TMEM82A0PJX8 343 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 HRKO00198 91 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 UBOX5O94941 541 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 MPOP05164 745 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 BDNFP23560 247 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 YBX1P67809 324 aaKnown RBP5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 RNF4P78317 190 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 SERINC3Q13530 473 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 UBE4AQ14139 1066 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 MPP2Q14168 576 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 ZNF394Q53GI3 561 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 NBPF12Q5TAG4 269 aaPredicted RBP5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 DBX2Q6ZNG2 339 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 CXorf38Q8TB03 319 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 MZB1Q8WU39 189 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 SLC39A13Q96H72 371 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 SCYL1Q96KG9 808 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 RHOVQ96L33 236 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 TYW1Q9NV66 732 aaKnown RBP5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 RTEL1Q9NZ71 1219 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 MINPP1Q9UNW1 487 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 THRAP3Q9Y2W1 955 aaKnown RBP5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 COMMD10Q9Y6G5 202 aa5.58□□□□□ -1.52
SMARCA5-202ENST00000508573 ABLIM1O14639 778 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PPP1R12AO14974 1030 aaPredicted RBP5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 CDR1P51861 262 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 OS9Q13438 667 aaPredicted RBP5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PWP1Q13610 501 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 SKOR2Q2VWA4 1001 aaPredicted RBP5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 ODR4Q5SWX8 454 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 OLFML2BQ68BL8 750 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 REC114Q7Z4M0 266 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PRRT2Q7Z6L0 340 aaPredicted RBP5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 LDHDQ86WU2 507 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 RAVER1Q8IY67 606 aaKnown RBP5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 TMEFF1Q8IYR6 380 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 IL17RAQ96F46 866 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 SENP7Q9BQF6 1050 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PRDM14Q9GZV8 571 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 KLHL14Q9P2G3 628 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 TCEAL9Q9UHQ7 104 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PRKAB1Q9Y478 270 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PCDHB14Q9Y5E9 798 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 PCDHGB7Q9Y5F8 929 aa5.57□□□□□ -1.52
SMARCA5-202ENST00000508573 CCER2I3L3R5 266 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 MEIS1O00470 390 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 EXOC5O00471 708 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 PRAMEF1O95521 474 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 VIL1P09327 827 aaKnown RBP5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 ARL4AP40617 200 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 RAB3GAP1Q15042 981 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 GALNT18Q6P9A2 607 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 ZNF654Q8IZM8 581 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms