RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KCNA10Q16322 511 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 AKNAD1Q5T1N1 836 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 TTBK2Q6IQ55 1244 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 CCPG1Q9ULG6 757 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 FRMPD2Q68DX3 1309 aaPredicted RBP15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 A0A0C4DFX4 3053 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 CTAGE5O15320 804 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 PQBP1O60828 265 aaKnown RBP15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 C6orf222P0C671 652 aaPredicted RBP15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 PDHBP11177 359 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 SLC16A2P36021 539 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 MFAP1P55081 439 aaKnown RBP15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 GJA9P57773 515 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 C9orf50Q5SZB4 431 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 SYDE2Q5VT97 1194 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 ANKRD33Q7Z3H0 272 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 STARD7Q9NQZ5 370 aa15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 DDX49Q9Y6V7 483 aaKnown RBP15.33■□□□□ 0.04
HMGCS1-205ENST00000508319 ASB14A6NK59 587 aa15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 KIAA0355O15063 1070 aa15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 SNHG28P0DPA3 235 aa15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 CWC27Q6UX04 472 aaKnown RBP15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 NUP133Q8WUM0 1156 aa15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 TOX2Q96NM4 488 aa15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 RNF41Q9H4P4 317 aaPredicted RBP15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 MTMR10Q9NXD2 777 aa15.32■□□□□ 0.04
HMGCS1-205ENST00000508319 UNC80Q8N2C7 3258 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 NFIBO00712 420 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 ASGR1P07306 291 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 NKX3-2P78367 333 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 ZNF543Q08ER8 600 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 FAAP100Q0VG06 881 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 SHHQ15465 462 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 NSMFQ6X4W1 530 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 PCSK9Q8NBP7 692 aaKnown RBP15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 GLT1D1Q96MS3 346 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 PURBQ96QR8 312 aaKnown RBP15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 ELP1O95163 1332 aa15.31■□□□□ 0.04
HMGCS1-205ENST00000508319 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 PTGS1P23219 599 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 TNFAIP2Q03169 654 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 CUL9Q8IWT3 2517 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 FBXO16Q8IX29 292 aaPredicted RBP15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 MORC4Q8TE76 937 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 ESR2Q92731 530 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 TTC14Q96N46 770 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 TBX21Q9UL17 535 aa15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 GNEQ9Y223 722 aaKnown RBP15.3■□□□□ 0.04
HMGCS1-205ENST00000508319 DCDC2CA8MYV0 355 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 HIP1O00291 1037 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 ZNF213O14771 459 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 CDK7P50613 346 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 EPHB4P54760 987 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 BEX3Q00994 111 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 BAATQ14032 418 aaPredicted RBP15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 GNASQ5JWF2 1037 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 FAM109BQ6ICB4 259 aaPredicted RBP15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 TLK2Q86UE8 772 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 ZKSCAN3Q9BRR0 538 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 DSCC1Q9BVC3 393 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 IL25Q9H293 177 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 TMEM39AQ9NV64 488 aa15.29■□□□□ 0.04
HMGCS1-205ENST00000508319 MROH7Q68CQ1 1323 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 WDR19Q8NEZ3 1342 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 A0A0U1RQG5 324 aaPredicted RBP15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 KDM4AO75164 1064 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 RAG1P15918 1043 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 SMPD1P17405 629 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 PDE4AP27815 886 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 NT5C2P49902 561 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 SLC30A10Q6XR72 485 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 EEPD1Q7L9B9 569 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 PDGFCQ9NRA1 345 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 STXBP5LQ9Y2K9 1186 aa15.28■□□□□ 0.04
HMGCS1-205ENST00000508319 ALDH5A1P51649 535 aaPredicted RBP15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 FSCN1Q16658 493 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 GPATCH4Q5T3I0 446 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 DGKHQ86XP1 1220 aa15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 FAM126BQ8IXS8 530 aa15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 GUCD1Q96NT3 240 aa15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 CPVLQ9H3G5 476 aa15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
HMGCS1-205ENST00000508319 MYH6P13533 1939 aa15.27■□□□□ 0.03
HMGCS1-205ENST00000508319 LOC102724159A0A0B4J2E5 919 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 PTPDC1A2A3K4 754 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 B4E1Z4 1266 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 ARVCFO00192 962 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 TIMP1P01033 207 aa15.26■□□□□ 0.03
HMGCS1-205ENST00000508319 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms