RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 BRF1Q92994 677 aa6.35□□□□□ -1.39
CLOCK-207ENST00000508049 PDLIM7Q9NR12 457 aa6.35□□□□□ -1.39
CLOCK-207ENST00000508049 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 F8W031 263 aaPredicted RBP6.34□□□□□ -1.39
CLOCK-207ENST00000508049 FGF10O15520 208 aaPredicted RBP6.34□□□□□ -1.39
CLOCK-207ENST00000508049 SRGAP3O43295 1099 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 PDIA4P13667 645 aaKnown RBP6.34□□□□□ -1.39
CLOCK-207ENST00000508049 PMS1P54277 932 aaKnown RBP6.34□□□□□ -1.39
CLOCK-207ENST00000508049 EFEMP1Q12805 493 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 DCAF15Q66K64 600 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 FNIP1Q8TF40 1166 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 USP40Q9NVE5 1235 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 DBR1Q9UK59 544 aaKnown RBP6.34□□□□□ -1.39
CLOCK-207ENST00000508049 PLA2G2DQ9UNK4 145 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 FAN1Q9Y2M0 1017 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 PMF1-BGLAPU3KQ54 211 aa6.34□□□□□ -1.39
CLOCK-207ENST00000508049 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
CLOCK-207ENST00000508049 ATF2P15336 505 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 FBLN1P23142 703 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 TACR1P25103 407 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 ZNF445P59923 1031 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 PRR5P85299 388 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 CCDC27Q2M243 656 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 ZXDCQ2QGD7 858 aaPredicted RBP6.33□□□□□ -1.4
CLOCK-207ENST00000508049 VWA3BQ502W6 1294 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 NT5DC1Q5TFE4 455 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 RGS22Q8NE09 1264 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 SPATA25Q9BR10 227 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 SPON2Q9BUD6 331 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
CLOCK-207ENST00000508049 GP6Q9HCN6 339 aa6.33□□□□□ -1.4
CLOCK-207ENST00000508049 TP53P04637 393 aaPredicted RBP6.32□□□□□ -1.4
CLOCK-207ENST00000508049 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 AXDND1Q5T1B0 1012 aaPredicted RBP6.32□□□□□ -1.4
CLOCK-207ENST00000508049 ZFYVE27Q5T4F4 411 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 LIPIQ6XZB0 460 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 PPFIBP1Q86W92 1011 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 FIBCD1Q8N539 461 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 SMARCC1Q92922 1105 aaPredicted RBP6.32□□□□□ -1.4
CLOCK-207ENST00000508049 FCRL3Q96P31 734 aaPredicted RBP6.32□□□□□ -1.4
CLOCK-207ENST00000508049 FAM86C1Q9NVL1 165 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 ZNRF3Q9ULT6 936 aa6.32□□□□□ -1.4
CLOCK-207ENST00000508049 TBC1D8O95759 1140 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 IMPDH2P12268 514 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 NCAM1P13591 858 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 MRPL58Q14197 206 aaKnown RBP6.31□□□□□ -1.4
CLOCK-207ENST00000508049 ZNF326Q5BKZ1 582 aaKnown RBP6.31□□□□□ -1.4
CLOCK-207ENST00000508049 FERMT3Q86UX7 667 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 ZNF526Q8TF50 670 aaPredicted RBP6.31□□□□□ -1.4
CLOCK-207ENST00000508049 PTCHD1Q96NR3 888 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 BCL2L13Q9BXK5 485 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 RNF38Q9H0F5 515 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 SF3B6Q9Y3B4 125 aaKnown RBP6.31□□□□□ -1.4
CLOCK-207ENST00000508049 FHOD1Q9Y613 1164 aa6.31□□□□□ -1.4
CLOCK-207ENST00000508049 CD3EP07766 207 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 INSRRP14616 1297 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 CD247P20963 164 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 L1CAMP32004 1257 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 MC3RP41968 323 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 CORO7P57737 925 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 GIPC2Q8TF65 315 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 ALG3Q92685 438 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 FERD3LQ96RJ6 166 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 BCL11AQ9H165 835 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 TMPRSS5Q9H3S3 457 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 NOL6Q9H6R4 1146 aaKnown RBP6.3□□□□□ -1.4
CLOCK-207ENST00000508049 ZNF451Q9Y4E5 1061 aa6.3□□□□□ -1.4
CLOCK-207ENST00000508049 K7ESM1 405 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 ASGR2P07307 311 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 ITGA4P13612 1032 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 IFNGR1P15260 489 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 HTRA3P83110 453 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 POU4F1Q01851 419 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 FBXW10Q5XX13 1052 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 HHIPL2Q6UWX4 724 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 TAB3Q8N5C8 712 aaPredicted RBP6.29□□□□□ -1.4
CLOCK-207ENST00000508049 NLGN2Q8NFZ4 835 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 ZDHHC15Q96MV8 337 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 GPR20Q99678 358 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
CLOCK-207ENST00000508049 SH3D21A4FU49 640 aa6.28□□□□□ -1.4
CLOCK-207ENST00000508049 PUM1Q14671 1186 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLOCK-207ENST00000508049 ZYXQ15942 572 aaKnown RBP6.28□□□□□ -1.4
CLOCK-207ENST00000508049 UNC5AQ6ZN44 842 aa6.28□□□□□ -1.4
CLOCK-207ENST00000508049 TMEM87AQ8NBN3 555 aa6.28□□□□□ -1.4
CLOCK-207ENST00000508049 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
CLOCK-207ENST00000508049 BCAS3Q9H6U6 928 aa6.28□□□□□ -1.4
CLOCK-207ENST00000508049 RXFP1Q9HBX9 757 aa6.28□□□□□ -1.4
CLOCK-207ENST00000508049 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
CLOCK-207ENST00000508049 PPP2R5DQ14738 602 aa6.27□□□□□ -1.41
CLOCK-207ENST00000508049 TCEAL1Q15170 157 aa6.27□□□□□ -1.41
CLOCK-207ENST00000508049 CABP7Q86V35 215 aa6.27□□□□□ -1.41
CLOCK-207ENST00000508049 CARFQ8N187 725 aa6.27□□□□□ -1.41
CLOCK-207ENST00000508049 GZF1Q9H116 711 aaPredicted RBP6.27□□□□□ -1.41
CLOCK-207ENST00000508049 CNOT11Q9UKZ1 510 aaKnown RBP6.27□□□□□ -1.41
CLOCK-207ENST00000508049 GLI4P10075 376 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms