RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TCRBV5S4A2TA0A5A2 114 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 BICDL2A1A5D9 508 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 SPDYE5A6NIY4 337 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 EIF3CLB5ME19 914 aaKnown RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 KCNJ18B7U540 433 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA8KD6RF30 607 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PSMA7O14818 248 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 TEX33O43247 280 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 USO1O60763 962 aaKnown RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 MBD4O95243 580 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 STARD3NLO95772 234 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 JUNDP17535 347 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 RXRAP19793 462 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 ITGA6P23229 1130 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CALML3P27482 149 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 ARHGAP25P42331 645 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 AFMP43652 599 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 DNM2P50570 870 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 GTF2A1P52655 376 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 ATP2C1P98194 919 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 SETQ01105 290 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 APBA1Q02410 837 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 UBXN1Q04323 297 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PDE4CQ08493 712 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PPFIA1Q13136 1202 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 SCARF1Q14162 830 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 KCNJ12Q14500 433 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 MTF1Q14872 753 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 KRT31Q15323 416 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF827Q17R98 1081 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 HSP90AA4PQ58FG1 418 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 TCP11X2Q5H9J9 407 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 SPECC1Q5M775 1068 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PAPD7Q5XG87 772 aaKnown RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 ICE2Q659A1 982 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CATIPQ7Z7H3 387 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC24Q8N4L8 307 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC155Q8N6L0 562 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 SPATA5Q8NB90 893 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 COG1Q8WTW3 980 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRERF1Q96PN7 1200 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 RUFY1Q96T51 708 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PNKPQ96T60 521 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CDC5LQ99459 802 aaKnown RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 EIF3CQ99613 913 aaKnown RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 DNAJC7Q99615 494 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PHF20Q9BVI0 1012 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CUEDC2Q9H467 287 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 THAP9Q9H5L6 903 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 FAM204AQ9H8W3 233 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 PIH1D3Q9NQM4 214 aaKnown RBP5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 ANAPC4Q9UJX5 808 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 HPCAL4Q9UM19 191 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CAPN11Q9UMQ6 739 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 KCNJ14Q9UNX9 436 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 CTNND2Q9UQB3 1225 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 DISP2A7MBM2 1401 aa5.56□□□□□ -1.52
HMGB3P16-201ENST00000508037 UBR2Q8IWV8 1755 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 ATXN2Q99700 1313 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 KCPQ6ZWJ8 1503 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 A0A1W2PQJ5 194 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA6CA6NDK9 693 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA6BA6NDN3 693 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 LGALS16A8MUM7 142 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 EBAG9O00559 213 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 PDE8AO60658 829 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 SHOX2O60902 331 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 TACC1O75410 805 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 A1BGP04217 495 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 RPN1P04843 607 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA6DP0CG33 693 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRLRP16471 622 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 ATF3P18847 181 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 NOP2P46087 812 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 FXR1P51114 621 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 STX17P56962 302 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 IRX3P78415 501 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 CDK17Q00537 523 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 KIF5AQ12840 1032 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 NNTQ13423 1086 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 MTMR2Q13614 643 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 KCNB1Q14721 858 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 SPA17Q15506 151 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GLE1Q53GS7 698 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC178Q5BJE1 867 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC122Q5T0U0 273 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 ALS2CLQ60I27 953 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 RSBN1LQ6PCB5 846 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 LRRC31Q6UY01 552 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 MICALCLQ6ZW33 695 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 B4GALNT4Q76KP1 1039 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 PROSER2Q86WR7 435 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 IQCA1Q86XH1 822 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 SUGP1Q8IWZ8 645 aaKnown RBP5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 GRAMD1CQ8IYS0 662 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 MMGT1Q8N4V1 131 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 MAGEB6Q8N7X4 407 aa5.55□□□□□ -1.52
HMGB3P16-201ENST00000508037 MB21D1Q8N884 522 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms