RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 HOMER2Q9NSB8 354 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 NRBP1Q9UHY1 535 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 TBX21Q9UL17 535 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 ZNF214Q9UL59 606 aaPredicted RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 DIS3Q9Y2L1 958 aaKnown RBP6.92□□□□□ -1.3
GYPB-208ENST00000507009 RIPK3Q9Y572 518 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 SLC4A4Q9Y6R1 1079 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 CDH23Q9H251 3354 aa6.92□□□□□ -1.3
GYPB-208ENST00000507009 A0A0U1RQG5 324 aaPredicted RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 MINDY4BA8MYZ0 360 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 BHMG1C9JSJ3 638 aaPredicted RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 ARVCFO00192 962 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 ADCY6O43306 1168 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 ZBED4O75132 1171 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 SNAI1O95863 264 aaPredicted RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 FGBP02675 491 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 PTGS1P23219 599 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 COPB2P35606 906 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 PTPN5P54829 565 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 IKQ13123 557 aaPredicted RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 RAB30Q15771 203 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 PSRC1Q6PGN9 363 aaPredicted RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 CXCL17Q6UXB2 119 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 C16orf86Q6ZW13 317 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 PCSK9Q8NBP7 692 aaKnown RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 KLHDC9Q8NEP7 349 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 PANK1Q8TE04 598 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 ATXN2LQ8WWM7 1075 aaKnown RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 FAM122AQ96E09 287 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 TOX2Q96NM4 488 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 TEX13BQ9BXU2 312 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 MTIF3Q9H2K0 278 aaKnown RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 MKNK2Q9HBH9 465 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 ATP8A2Q9NTI2 1148 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 PAG1Q9NWQ8 432 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 CLIP2Q9UDT6 1046 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 DDX49Q9Y6V7 483 aaKnown RBP6.91□□□□□ -1.3
GYPB-208ENST00000507009 UMODL1Q5DID0 1318 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 MROH7Q68CQ1 1323 aa6.91□□□□□ -1.3
GYPB-208ENST00000507009 MYH7P12883 1935 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 MYH4Q9Y623 1939 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.9□□□□□ -1.3
GYPB-208ENST00000507009 F5H6K3 240 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 RFXAPO00287 272 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 NDUFB10O96000 172 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 MYOGP15173 224 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 ADD2P35612 726 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 CNTN2Q02246 1040 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 TFF2Q03403 129 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 KLRC3Q07444 240 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 HSP90AB4PQ58FF6 505 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 AKNAD1Q5T1N1 836 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 PPP2R2DQ66LE6 453 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 CTR9Q6PD62 1173 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 TMED8Q6PL24 325 aaPredicted RBP6.9□□□□□ -1.3
GYPB-208ENST00000507009 ARMCX2Q7L311 632 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 EEPD1Q7L9B9 569 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 FAM126BQ8IXS8 530 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 LRRC47Q8N1G4 583 aaKnown RBP6.9□□□□□ -1.3
GYPB-208ENST00000507009 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 SCLYQ96I15 445 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.9□□□□□ -1.3
GYPB-208ENST00000507009 HIPK3Q9H422 1215 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 IL23AQ9NPF7 189 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 MTMR7Q9Y216 660 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
GYPB-208ENST00000507009 ELP1O95163 1332 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 SYNGAP1Q96PV0 1343 aa6.9□□□□□ -1.3
GYPB-208ENST00000507009 MYO9BQ13459 2157 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 GOLGA8CPA6NN73 597 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 PRDM1O75626 825 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 PLA2G5P39877 138 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 CDK7P50613 346 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 KCNQ1P51787 676 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 GJA9P57773 515 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 SNAP25P60880 206 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 PSMC6P62333 389 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 TNFAIP2Q03169 654 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 CCSAPQ6IQ19 270 aaPredicted RBP6.89□□□□□ -1.31
GYPB-208ENST00000507009 DEFB128Q7Z7B8 93 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 TLK2Q86UE8 772 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
GYPB-208ENST00000507009 PPP1R13LQ8WUF5 828 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 KIF1BPQ96EK5 621 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 AP5M1Q9H0R1 490 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 TRPV6Q9H1D0 765 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 ABHD16BQ9H3Z7 469 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 PCDHGA10Q9Y5H3 936 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
GYPB-208ENST00000507009 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms