RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 RPTORQ8N122 1335 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 PPP1R11O60927 126 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 GJB1P08034 283 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 CASTP20810 708 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 RPS6KB1P23443 525 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 CCND3P30281 292 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 USH1GQ495M9 461 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 C8orf34Q49A92 452 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 APOA5Q6Q788 366 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 TRPV1Q8NER1 839 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 SLC12A7Q9Y666 1083 aa21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 BAZ2BQ9UIF8 2168 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-216ENST00000506537 PDE4DIPQ5VU43 2346 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 PLEKHA8P1O95397 391 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 CYBAP13498 195 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 MICU3Q86XE3 530 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 FAM133AQ8N9E0 248 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 DEFB118Q96PH6 123 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 HMX1Q9NP08 348 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 CYP39A1Q9NYL5 469 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 PNMA2Q9UL42 364 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 TNRC18O15417 2968 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 ASTN1O14525 1302 aa21.22■□□□□ 0.99
PDLIM7-216ENST00000506537 FRMPD3Q5JV73 1810 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 PSMA5P28066 241 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 KIF5BP33176 963 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 GJA8P48165 433 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 NSMFQ6X4W1 530 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 Q6ZUG5 572 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 PIGSQ96S52 555 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 TINF2Q9BSI4 451 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 ZSWIM6Q9HCJ5 1215 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 PFASO15067 1338 aa21.21■□□□□ 0.99
PDLIM7-216ENST00000506537 POTEB2H3BUK9 544 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 ZBTB5O15062 677 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 CALM1P0DP23 149 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 CALM2P0DP24 149 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 CALM3P0DP25 149 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 SLC30A10Q6XR72 485 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 FBXO11Q86XK2 927 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 HOMER1Q86YM7 354 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 CMTR1Q8N1G2 835 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 SRBD1Q8N5C6 995 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 PURBQ96QR8 312 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 SPZ1Q9BXG8 430 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 AGXT2Q9BYV1 514 aa21.2■□□□□ 0.98
PDLIM7-216ENST00000506537 MCM3APO60318 1980 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 LRRC37A2A6NM11 1700 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 KLF18A0A0U1RQI7 1052 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 SOWAHBA6NEL2 793 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 SGPL1O95470 568 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 APOBRQ0VD83 1088 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 BAATQ14032 418 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 PRAMEF19Q5SWL8 479 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 MAMDC4Q6UXC1 1216 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 RUFY3Q7L099 469 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 ZNF467Q7Z7K2 595 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 FBXL16Q8N461 479 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 FANCBQ8NB91 859 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 BRF1Q92994 677 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 TM6SF1Q9BZW5 370 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 ABCB11O95342 1321 aa21.19■□□□□ 0.98
PDLIM7-216ENST00000506537 OPLAHO14841 1288 aa21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 TMTC3Q6ZXV5 915 aa21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 AMNQ9BXJ7 453 aa21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 UPF3BQ9BZI7 483 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 CRISPLD2Q9H0B8 497 aa21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 GTF3C3Q9Y5Q9 886 aa21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 DDX49Q9Y6V7 483 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 SYNGAP1Q96PV0 1343 aa21.18■□□□□ 0.98
PDLIM7-216ENST00000506537 PTPDC1A2A3K4 754 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 ZBTB43O43298 467 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 SNAI1O95863 264 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 RPS6P62753 249 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 FGD1P98174 961 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 LHX8Q68G74 356 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 SYNE3Q6ZMZ3 975 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 MSL3Q8N5Y2 521 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 PIBF1Q8WXW3 757 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 TBC1D5Q92609 795 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 LZTS2Q9BRK4 669 aa21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 FAM217BQ9NTX9 383 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-216ENST00000506537 PNMA6FA0A0J9YX94 578 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 SMARCA1P28370 1054 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 GNAQP50148 359 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 TOB2Q14106 344 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 RNF207Q6ZRF8 634 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 ARMCX2Q7L311 632 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 IL17RAQ96F46 866 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 CYP46A1Q9Y6A2 500 aa21.16■□□□□ 0.98
PDLIM7-216ENST00000506537 NID2Q14112 1375 aa21.15■□□□□ 0.98
PDLIM7-216ENST00000506537 CNTNAP5Q8WYK1 1306 aa21.15■□□□□ 0.98
PDLIM7-216ENST00000506537 GOLGA8AA7E2F4 631 aa21.15■□□□□ 0.98
PDLIM7-216ENST00000506537 GOLGA8BA8MQT2 603 aa21.15■□□□□ 0.98
PDLIM7-216ENST00000506537 ZNF865P0CJ78 1059 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-216ENST00000506537 CALML3P27482 149 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms