RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 FAM205CA6NFA0 338 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 CELF2O95319 508 aaKnown RBP13□□□□□ -0.33
ITGA3-208ENST00000506437 ASNSP08243 561 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 FUT2Q10981 343 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 NR5A1Q13285 461 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 CEP135Q66GS9 1140 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 GOLGA6L1Q8N7Z2 621 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
ITGA3-208ENST00000506437 PICK1Q9NRD5 415 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 CNTNAP5Q8WYK1 1306 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 KIF28PB7ZC32 967 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 PTPRAP18433 802 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
ITGA3-208ENST00000506437 PKN1Q16512 942 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
ITGA3-208ENST00000506437 SEC31AO94979 1220 aaKnown RBP12.99□□□□□ -0.33
ITGA3-208ENST00000506437 GRM4Q14833 912 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 PNMA8AQ86V59 439 aaPredicted RBP12.99□□□□□ -0.33
ITGA3-208ENST00000506437 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 DDAH1O94760 285 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 IFNAR1P17181 557 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 LMAN1P49257 510 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
ITGA3-208ENST00000506437 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
ITGA3-208ENST00000506437 DRC7Q8IY82 874 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
ITGA3-208ENST00000506437 PALM3A6NDB9 673 aaPredicted RBP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 TBC1D12O60347 775 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 KRT40Q6A162 431 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 TRIM22Q8IYM9 498 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 TANGO6Q9C0B7 1094 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 MYH6P13533 1939 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 SCYL3Q8IZE3 742 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 ARHGEF10LQ9HCE6 1279 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
ITGA3-208ENST00000506437 SNCAIPQ9Y6H5 919 aa12.98□□□□□ -0.33
ITGA3-208ENST00000506437 FIBPO43427 364 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 BRD1O95696 1058 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 ZSCAN22P10073 491 aaPredicted RBP12.97□□□□□ -0.33
ITGA3-208ENST00000506437 SCP2P22307 547 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 MAP2K2P36507 400 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 EARS2Q5JPH6 523 aaKnown RBP12.97□□□□□ -0.33
ITGA3-208ENST00000506437 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 CCDC91Q7Z6B0 441 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 CCDC34Q96HJ3 373 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 PLCD4Q9BRC7 762 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 PAXBP1Q9Y5B6 917 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 PPP1R11O60927 126 aaPredicted RBP12.97□□□□□ -0.33
ITGA3-208ENST00000506437 KIF5BP33176 963 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 CREBRFQ8IUR6 639 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 ATAD5Q96QE3 1844 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 WWC2Q6AWC2 1192 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 TTC19Q6DKK2 380 aaPredicted RBP12.97□□□□□ -0.33
ITGA3-208ENST00000506437 JMJD4Q9H9V9 463 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
ITGA3-208ENST00000506437 BMP3P12645 472 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 HTRA3P83110 453 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
ITGA3-208ENST00000506437 ARID5BQ14865 1188 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 NBPF20Q3BBV1 942 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 CST9Q5W186 159 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 CSADQ9Y600 493 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.33
ITGA3-208ENST00000506437 F13A1P00488 732 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 CALM1P0DP23 149 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 CALM2P0DP24 149 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 CALM3P0DP25 149 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 NF2P35240 595 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.34
ITGA3-208ENST00000506437 MAP3K9P80192 1104 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 SKIDA1Q1XH10 827 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 TREML2Q5T2D2 321 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 RPAINQ86UA6 219 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.34
ITGA3-208ENST00000506437 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.34
ITGA3-208ENST00000506437 OAS2P29728 719 aaKnown RBP12.95□□□□□ -0.34
ITGA3-208ENST00000506437 REXO1L1PQ8IX06 675 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 ANKRD20A12PQ8NF67 263 aa12.95□□□□□ -0.34
ITGA3-208ENST00000506437 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms