RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 FAM205CA6NFA0 338 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 FLOT1O75955 427 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 VCAM1P19320 739 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 TXLNAP40222 546 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 PRPHP41219 470 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 PTGDRQ13258 359 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 PRKG1Q13976 671 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 USH1GQ495M9 461 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 RESP18Q5W5W9 173 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 ERO1BQ86YB8 467 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 SAMD3Q8N6K7 520 aa13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
POLR2J3-211ENST00000506060 SYCE3A1L190 88 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 NR1I2O75469 434 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 ICAM1P05362 532 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 LONP1P36776 959 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 SYKP43405 635 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 PPATQ06203 517 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 VGLL4Q14135 290 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 LETM2Q2VYF4 491 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 SH3D19Q5HYK7 790 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 MCF2L2Q86YR7 1114 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 SDF4Q9BRK5 362 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 PPP1R9AQ9ULJ8 1098 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 AFG3L2Q9Y4W6 797 aa13.67□□□□□ -0.22
POLR2J3-211ENST00000506060 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 FAM237AA0A1B0GTK4 181 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 A0A1B0GVL5 298 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L15C9J2P7 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L13C9JLJ4 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L11C9JVI0 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L18D6R9N7 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L22D6RA61 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L17D6RBQ6 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L19D6RCP7 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L20D6RJB6 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 NEMFO60524 1076 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 PFKFB1P16118 471 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP11P51784 963 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 HMGCS2P54868 508 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP17L24Q0WX57 530 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 FMR1NBQ8N0W7 255 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 ENGASEQ8NFI3 743 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 TSPY26PQ9H489 355 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 HOXC10Q9NYD6 342 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 MAP3K20Q9NYL2 800 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 SNCAIPQ9Y6H5 919 aa13.66□□□□□ -0.22
POLR2J3-211ENST00000506060 PHIPQ8WWQ0 1821 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 CXCL11O14625 94 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 ZNF202O95125 648 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 OR52Z1P0C646 297 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 NDUFA8P51970 172 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 OAZ1P54368 228 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 SNAP25P60880 206 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 FKBP1BP68106 108 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 COG2Q14746 738 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 UBE2SQ16763 222 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 MOXD1Q6UVY6 613 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 ANO3Q9BYT9 981 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 MAF1Q9H063 256 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 GOLPH3LQ9H4A5 285 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 SLC38A10Q9HBR0 1119 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 RABGAP1Q9Y3P9 1069 aa13.65□□□□□ -0.22
POLR2J3-211ENST00000506060 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
POLR2J3-211ENST00000506060 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
POLR2J3-211ENST00000506060 POTECB2RU33 542 aa13.64□□□□□ -0.23
POLR2J3-211ENST00000506060 MARCH6O60337 910 aa13.64□□□□□ -0.23
POLR2J3-211ENST00000506060 MRE11P49959 708 aa13.64□□□□□ -0.23
POLR2J3-211ENST00000506060 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLR2J3-211ENST00000506060 PPIL2Q13356 520 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms