RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 DIAPH1O60610 1272 aaKnown RBP8.5□□□□□ -1.05
NIPBL-205ENST00000505998 TBC1D8O95759 1140 aa8.5□□□□□ -1.05
NIPBL-205ENST00000505998 HPXP02790 462 aa8.5□□□□□ -1.05
NIPBL-205ENST00000505998 KCNJ6P48051 423 aa8.5□□□□□ -1.05
NIPBL-205ENST00000505998 ERVFC1P60507 584 aa8.5□□□□□ -1.05
NIPBL-205ENST00000505998 SLC14A2Q15849 920 aa8.5□□□□□ -1.05
NIPBL-205ENST00000505998 HLA-DQA1Q5Y7H0 255 aa8.5□□□□□ -1.05
NIPBL-205ENST00000505998 ATG4DQ86TL0 474 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-205ENST00000505998 BAZ1AQ9NRL2 1556 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-205ENST00000505998 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 FADS2P1A8MWK0 482 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 IGSF3O75054 1194 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 CPP00450 1065 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 ECI1P42126 302 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 GRIA2P42262 883 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 NR0B2Q15466 257 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 MYLIPQ8WY64 445 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 COPS5Q92905 334 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 PIF1Q9H611 641 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 ARHGEF4Q9NR80 690 aa8.49□□□□□ -1.05
NIPBL-205ENST00000505998 THBDP07204 575 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 PAMP19021 973 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 GFRA1P56159 465 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 RTP1P59025 263 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 SF1Q15637 639 aaKnown RBP8.48□□□□□ -1.05
NIPBL-205ENST00000505998 JAMLQ86YT9 394 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 LILRA2Q8N149 483 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 IER2Q9BTL4 223 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 GPRC5CQ9NQ84 441 aa8.48□□□□□ -1.05
NIPBL-205ENST00000505998 TRBV23OR9-2A0A075B6M9 112 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 A0A1W2PQ45 241 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-205ENST00000505998 A0A1W2PQY0 241 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 PRODHO43272 600 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 CAPNS1P04632 268 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 SCG5P05408 212 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 TRHRP34981 398 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-205ENST00000505998 LAPTM5Q13571 262 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 SLCO6A1Q86UG4 719 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 ZBTB38Q8NAP3 1195 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-205ENST00000505998 ABHD4Q8TB40 342 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 KCTD13Q8WZ19 329 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 KIRREL1Q96J84 757 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 C19orf44Q9H6X5 657 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 CLEC1BQ9P126 229 aa8.47□□□□□ -1.05
NIPBL-205ENST00000505998 NPHP3-ACAD11A0A0J9YXS1 232 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 WTIPA6NIX2 430 aaPredicted RBP8.46□□□□□ -1.06
NIPBL-205ENST00000505998 NRDCO43847 1150 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 ADCY3O60266 1144 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 FGFR1P11362 822 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 PLS3P13797 630 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 GALNT18Q6P9A2 607 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 NSMFQ6X4W1 530 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 TMEM145Q8NBT3 493 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 IPO9Q96P70 1041 aaKnown RBP8.46□□□□□ -1.06
NIPBL-205ENST00000505998 CDC6Q99741 560 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 SP110Q9HB58 689 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 GPR160Q9UJ42 338 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 TAF6LQ9Y6J9 622 aa8.46□□□□□ -1.06
NIPBL-205ENST00000505998 CECR2Q9BXF3 1484 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 FAM153BP0C7A2 387 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 PABPC1P11940 636 aaKnown RBP8.45□□□□□ -1.06
NIPBL-205ENST00000505998 CEBPAP49715 358 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-205ENST00000505998 CYP4F3Q08477 520 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 MAP4K2Q12851 820 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 PRSS53Q2L4Q9 553 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 HSF5Q4G112 596 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-205ENST00000505998 FYB2Q5VWT5 728 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 CPNE8Q86YQ8 564 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 LILRB2Q8N423 598 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 NPLOC4Q8TAT6 608 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 FRS2Q8WU20 508 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 JMJD8Q96S16 334 aa8.45□□□□□ -1.06
NIPBL-205ENST00000505998 A0A1W2PQ27 194 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 A0A1W2PQ64 194 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 A0A1W2PQC6 194 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 A0A1W2PQD8 194 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 MEFVO15553 781 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-205ENST00000505998 PSPNO60542 156 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 JUNBP17275 347 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-205ENST00000505998 L1CAMP32004 1257 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 SNX17Q15036 470 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 KCNMB1Q16558 191 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 LONRF2Q1L5Z9 754 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 TIGD5Q53EQ6 642 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 YOD1Q5VVQ6 348 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-205ENST00000505998 E4F1Q66K89 784 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-205ENST00000505998 THAP3Q8WTV1 239 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-205ENST00000505998 MMP19Q99542 508 aa8.44□□□□□ -1.06
NIPBL-205ENST00000505998 NOTOA8MTQ0 251 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 DLX3O60479 287 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 PAPLNO95428 1278 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 ITGB5P18084 799 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 C2orf27AQ580R0 203 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 TMEM67Q5HYA8 995 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 ZC3H12BQ5HYM0 836 aaKnown RBP8.43□□□□□ -1.06
NIPBL-205ENST00000505998 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 IQCEQ6IPM2 695 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 ZSWIM9Q86XI8 627 aa8.43□□□□□ -1.06
NIPBL-205ENST00000505998 SCUBE1Q8IWY4 988 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms