RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 GPAT2Q6NUI2 795 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 Q7L0L9 218 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
SGCA-205ENST00000505964 CHURC1Q8WUH1 139 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 MTMR8Q96EF0 704 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 RRP36Q96EU6 259 aaKnown RBP13.07□□□□□ -0.32
SGCA-205ENST00000505964 PARK7Q99497 189 aaKnown RBP13.07□□□□□ -0.32
SGCA-205ENST00000505964 SH3GLB2Q9NR46 395 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 ATP6V1DQ9Y5K8 247 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
SGCA-205ENST00000505964 PPFIA3O75145 1194 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 F13A1P00488 732 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 FLT3LGP49771 235 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 STAT2P52630 851 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 CLEC17AQ6ZS10 378 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 ADGRF4Q8IZF3 695 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 DIS3LQ8TF46 1054 aaKnown RBP13.06□□□□□ -0.32
SGCA-205ENST00000505964 TNPO1Q92973 898 aaKnown RBP13.06□□□□□ -0.32
SGCA-205ENST00000505964 AIFM3Q96NN9 605 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
SGCA-205ENST00000505964 SEC63Q9UGP8 760 aaKnown RBP13.06□□□□□ -0.32
SGCA-205ENST00000505964 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
SGCA-205ENST00000505964 PNMA6FA0A0J9YX94 578 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 A0A1W2PPC1 479 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 MTMR2Q13614 643 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 FAM83BQ5T0W9 1011 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 KRT40Q6A162 431 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 GADL1Q6ZQY3 521 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 CCDC148Q8NFR7 591 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 PAWRQ96IZ0 340 aaKnown RBP13.05□□□□□ -0.32
SGCA-205ENST00000505964 NUP88Q99567 741 aaPredicted RBP13.05□□□□□ -0.32
SGCA-205ENST00000505964 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
SGCA-205ENST00000505964 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
SGCA-205ENST00000505964 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
SGCA-205ENST00000505964 CXCL11O14625 94 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 MMP1P03956 469 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 TRAF1Q13077 416 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
SGCA-205ENST00000505964 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
SGCA-205ENST00000505964 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 DEFB123Q8N688 67 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 CCDC12Q8WUD4 166 aaPredicted RBP13.04□□□□□ -0.32
SGCA-205ENST00000505964 PIGSQ96S52 555 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 PHF20Q9BVI0 1012 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 BARHL2Q9NY43 387 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 TMOD4Q9NZQ9 345 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 PRR12Q9ULL5 1215 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
SGCA-205ENST00000505964 PLXNB2O15031 1838 aa13.04□□□□□ -0.32
SGCA-205ENST00000505964 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 hCG_1642624A0A1W2PR95 340 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 TRIM75PA6NK02 468 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 TNPO2O14787 897 aaKnown RBP13.03□□□□□ -0.32
SGCA-205ENST00000505964 ZBTB5O15062 677 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 FDX1P10109 184 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 SYN1P17600 705 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 VCAM1P19320 739 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 CALML3P27482 149 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 SLC16A2P36021 539 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
SGCA-205ENST00000505964 GUCY1B3Q02153 619 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
SGCA-205ENST00000505964 RESTQ13127 1097 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 WWC2Q6AWC2 1192 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 HOMER1Q86YM7 354 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 GBP4Q96PP9 640 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 VPS54Q9P1Q0 977 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
SGCA-205ENST00000505964 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
SGCA-205ENST00000505964 ESYT2A0FGR8 921 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 STXBP3O00186 592 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 U2AF2P26368 475 aaKnown RBP eCLIP13.02□□□□□ -0.33
SGCA-205ENST00000505964 FOSBP53539 338 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 HMGCS2P54868 508 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 CDC37Q16543 378 aaPredicted RBP13.02□□□□□ -0.33
SGCA-205ENST00000505964 QRICH1Q2TAL8 776 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 BRAPQ7Z569 592 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 TEX2Q8IWB9 1127 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
SGCA-205ENST00000505964 DAGLBQ8NCG7 672 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 PROCA1Q8NCQ7 364 aaPredicted RBP13.02□□□□□ -0.33
SGCA-205ENST00000505964 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
SGCA-205ENST00000505964 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.33
SGCA-205ENST00000505964 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms