RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 ASB14A6NK59 587 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 TRIM6-TRIM34B2RNG4 842 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 PTGS1P23219 599 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 HAND2P61296 217 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 NKX3-2P78367 333 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 SMAD3P84022 425 aaKnown RBP14.42□□□□□ -0.1
SNHG4-202ENST00000505522 BEX3Q00994 111 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 TNFAIP2Q03169 654 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 FPGSQ05932 587 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 RNPC3Q96LT9 517 aaKnown RBP14.42□□□□□ -0.1
SNHG4-202ENST00000505522 PURBQ96QR8 312 aaKnown RBP14.42□□□□□ -0.1
SNHG4-202ENST00000505522 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 RANBP17Q9H2T7 1088 aaKnown RBP14.42□□□□□ -0.1
SNHG4-202ENST00000505522 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 CYP39A1Q9NYL5 469 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 TBX21Q9UL17 535 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 LCTP09848 1927 aa14.42□□□□□ -0.1
SNHG4-202ENST00000505522 ZMYM6O95789 1325 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 ARVCFO00192 962 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 TIMP1P01033 207 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 ICAM1P05362 532 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 TOP1P11387 765 aaKnown RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 TMEM63BQ5T3F8 832 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 NSMFQ6X4W1 530 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 NOL8Q76FK4 1167 aaKnown RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 TTYH1Q9H313 450 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 PDGFCQ9NRA1 345 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 GNEQ9Y223 722 aaKnown RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 MROH7Q68CQ1 1323 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
SNHG4-202ENST00000505522 CCDC171Q6TFL3 1326 aa14.41□□□□□ -0.1
SNHG4-202ENST00000505522 SMPD1P17405 629 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 TBC1D10CQ8IV04 446 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 SMC5Q8IY18 1101 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 GPCPD1Q9NPB8 672 aa14.4□□□□□ -0.1
SNHG4-202ENST00000505522 NFIBO00712 420 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 IGHDP01880 384 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
SNHG4-202ENST00000505522 AKNAD1Q5T1N1 836 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 C16orf59Q7L2K0 433 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 FBXO16Q8IX29 292 aaPredicted RBP14.39□□□□□ -0.11
SNHG4-202ENST00000505522 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNHG4-202ENST00000505522 CDH23Q9H251 3354 aa14.39□□□□□ -0.11
SNHG4-202ENST00000505522 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-202ENST00000505522 PDHBP11177 359 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 SDSP20132 328 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-202ENST00000505522 IQSEC1Q6DN90 963 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 MFSD6Q6ZSS7 791 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
SNHG4-202ENST00000505522 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 RWDD1Q9H446 243 aaPredicted RBP14.38□□□□□ -0.11
SNHG4-202ENST00000505522 NEDD4P46934 1319 aa14.38□□□□□ -0.11
SNHG4-202ENST00000505522 CD4P01730 458 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 SNHG28P0DPA3 235 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 CSF2RAP15509 400 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 ALDH5A1P51649 535 aaPredicted RBP14.37□□□□□ -0.11
SNHG4-202ENST00000505522 NUCB1Q02818 461 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 AAMPQ13685 434 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 CHD1LQ86WJ1 897 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 CLEC4DQ8WXI8 215 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 TTC14Q96N46 770 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 ZKSCAN3Q9BRR0 538 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 GRIN2DO15399 1336 aa14.37□□□□□ -0.11
SNHG4-202ENST00000505522 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.36□□□□□ -0.11
SNHG4-202ENST00000505522 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.36□□□□□ -0.11
SNHG4-202ENST00000505522 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
SNHG4-202ENST00000505522 CABYRO75952 493 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 ACRP10323 421 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
SNHG4-202ENST00000505522 PPIGQ13427 754 aaKnown RBP eCLIP14.36□□□□□ -0.119e-10■□□□□ 10.7
SNHG4-202ENST00000505522 ITGA7Q13683 1181 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 TMEM240Q5SV17 173 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 SLC30A10Q6XR72 485 aa14.36□□□□□ -0.11
SNHG4-202ENST00000505522 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.36□□□□□ -0.118e-76■■■■□ 24.7
SNHG4-202ENST00000505522 EXOC6Q8TAG9 804 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms