RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 TTYH1Q9H313 450 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 HELLSQ9NRZ9 838 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
UBE2D3-219ENST00000505207 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 DYNC1LI2O43237 492 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 ORC4O43929 436 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 DNAJB2P25686 324 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 FAM126BQ8IXS8 530 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 TIFAQ96CG3 184 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■■■■□ 24.9
UBE2D3-219ENST00000505207 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 ZNF536O15090 1300 aa13.12□□□□□ -0.31
UBE2D3-219ENST00000505207 SOWAHBA6NEL2 793 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 B4DLN1 442 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 ICAM1P05362 532 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 ITGA7Q13683 1181 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 BRDTQ58F21 947 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 TMEM240Q5SV17 173 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 OTUD7AQ8TE49 926 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 ZNF576Q9H609 170 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 MSRAQ9UJ68 235 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-219ENST00000505207 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 ADCY6O43306 1168 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 CD4P01730 458 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 FGBP02675 491 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 CSF2RAP15509 400 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 BEX3Q00994 111 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 RAB30Q15771 203 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 TTC14Q96N46 770 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 GAS2L1Q99501 681 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 IL23AQ9NPF7 189 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
UBE2D3-219ENST00000505207 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 CTAGE5O15320 804 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 NMT2O60551 498 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 FGRP09769 529 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 SMPD1P17405 629 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 NOVP48745 357 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 NT5C2P49902 561 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 RAD50Q92878 1312 aa13.09□□□□□ -0.31
UBE2D3-219ENST00000505207 FGAP02671 866 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 CYP2C18P33260 490 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 CPT1AP50416 773 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 PDE1AP54750 535 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 SNAP25P60880 206 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 AAMPQ13685 434 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 BAATQ14032 418 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 TAPT1Q6NXT6 567 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 C16orf59Q7L2K0 433 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
UBE2D3-219ENST00000505207 PTPDC1A2A3K4 754 aa13.07□□□□□ -0.32
UBE2D3-219ENST00000505207 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms