RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 SLC14A2Q15849 920 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 PTPRNQ16849 979 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 LONRF2Q1L5Z9 754 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 SHROOM1Q2M3G4 852 aaPredicted RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 FNDC3BQ53EP0 1204 aaKnown RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 FOXB2Q5VYV0 432 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 PDE12Q6L8Q7 609 aaKnown RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 TATDN1Q6P1N9 297 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 PKN3Q6P5Z2 889 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 GPR155Q7Z3F1 870 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 ANKRD18AQ8IVF6 992 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 ZBTB38Q8NAP3 1195 aaPredicted RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 TTC16Q8NEE8 873 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 BICD2Q8TD16 824 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 SSH3Q8TE77 659 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 FNIP1Q8TF40 1166 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 KCTD13Q8WZ19 329 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 ZNF75CPQ92670 426 aaPredicted RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 PLD4Q96BZ4 506 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 MYO19Q96H55 970 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 NGLY1Q96IV0 654 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 MPHOSPH8Q99549 860 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 ADPGKQ9BRR6 497 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 IRAK4Q9NWZ3 460 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 SUCOQ9UBS9 1254 aaKnown RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 CFAP45Q9UL16 551 aa8.16□□□□□ -1.1
CDH9-202ENST00000505020 RRP7AQ9Y3A4 280 aaKnown RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 ZCCHC6Q5VYS8 1495 aaKnown RBP8.16□□□□□ -1.1
CDH9-202ENST00000505020 FSD2A1L4K1 749 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 MAFKO60675 156 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 CCND1P24385 295 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 TNNT3P45378 269 aaPredicted RBP8.15□□□□□ -1.1
CDH9-202ENST00000505020 RAC1P63000 192 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 DHCR24Q15392 516 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 MORN1Q5T089 497 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 BNC2Q6ZN30 1099 aaPredicted RBP8.15□□□□□ -1.1
CDH9-202ENST00000505020 CCDC149Q6ZUS6 474 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 CHST15Q7LFX5 561 aaPredicted RBP8.15□□□□□ -1.1
CDH9-202ENST00000505020 VSIG1Q86XK7 387 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 MAP4K3Q8IVH8 894 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 VPS45Q9NRW7 570 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 GPR34Q9UPC5 381 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 GIT1Q9Y2X7 761 aa8.15□□□□□ -1.1
CDH9-202ENST00000505020 PLOD2O00469 737 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 BACH1O14867 736 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 TLR3O15455 904 aaKnown RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 CYP17A1P05093 508 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 SLC3A2P08195 630 aaKnown RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 MYBL2P10244 700 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 SFTPCP11686 197 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 LRRC74AQ0VAA2 488 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 CFAP58Q5T655 872 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 USP51Q70EK9 711 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 FAM178BQ8IXR5 827 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 CBARPQ8N350 705 aaPredicted RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 CENPIQ92674 756 aaPredicted RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 GMCL1Q96IK5 515 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 AIFM3Q96NN9 605 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 INTS7Q9NVH2 962 aaKnown RBP8.15□□□□□ -1.11
CDH9-202ENST00000505020 CTNNA3Q9UI47 895 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 AGTPBP1Q9UPW5 1226 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 DNM3Q9UQ16 869 aa8.15□□□□□ -1.11
CDH9-202ENST00000505020 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 A6NNZ2 444 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 B4E171 279 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 MT-ND3P03897 115 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 ELF1P32519 619 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 KRT9P35527 623 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 SCNN1DP51172 638 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 SIK1P57059 783 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 AKAP17AQ02040 695 aaKnown RBP8.14□□□□□ -1.11
CDH9-202ENST00000505020 SETMARQ53H47 684 aaPredicted RBP8.14□□□□□ -1.11
CDH9-202ENST00000505020 BLOC1S3Q6QNY0 202 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 BTNL9Q6UXG8 535 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 FUBP3Q96I24 572 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDH9-202ENST00000505020 JAKMIP1Q96N16 626 aaKnown RBP8.14□□□□□ -1.11
CDH9-202ENST00000505020 NT5C1BQ96P26 610 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 BAG1Q99933 345 aaPredicted RBP8.14□□□□□ -1.11
CDH9-202ENST00000505020 NIFKQ9BYG3 293 aaKnown RBP8.14□□□□□ -1.11
CDH9-202ENST00000505020 ZFYVE28Q9HCC9 887 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 FAM184BQ9ULE4 1060 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 LRCH1Q9Y2L9 728 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 N6AMT1Q9Y5N5 214 aa8.14□□□□□ -1.11
CDH9-202ENST00000505020 SOS1Q07889 1333 aaPredicted RBP8.13□□□□□ -1.11
CDH9-202ENST00000505020 IL16Q14005 1332 aa8.13□□□□□ -1.11
CDH9-202ENST00000505020 MAGEB6P1A0A0J9YX57 407 aa8.13□□□□□ -1.11
CDH9-202ENST00000505020 F8W031 263 aaPredicted RBP8.13□□□□□ -1.11
CDH9-202ENST00000505020 GADD45BO75293 160 aaPredicted RBP8.13□□□□□ -1.11
CDH9-202ENST00000505020 MYCP01106 439 aaPredicted RBP8.13□□□□□ -1.11
CDH9-202ENST00000505020 LTFP02788 710 aa8.13□□□□□ -1.11
CDH9-202ENST00000505020 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
CDH9-202ENST00000505020 STMN1P16949 149 aa8.13□□□□□ -1.11
CDH9-202ENST00000505020 ID4P47928 161 aa8.13□□□□□ -1.11
CDH9-202ENST00000505020 NPTX2P47972 431 aa8.13□□□□□ -1.11
CDH9-202ENST00000505020 CAMK2GQ13555 558 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms