RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TTBK2Q6IQ55 1244 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 RWDD1Q9H446 243 aaPredicted RBP15.57■□□□□ 0.08
DDX41-204ENST00000504807 OSBPL3Q9H4L5 887 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 ZNF287Q9HBT7 754 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 STX8Q9UNK0 236 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 MTMR7Q9Y216 660 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 DIS3Q9Y2L1 958 aaKnown RBP15.57■□□□□ 0.08
DDX41-204ENST00000504807 MYO9BQ13459 2157 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 CCDC171Q6TFL3 1326 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 CHD7Q9P2D1 2997 aa15.57■□□□□ 0.08
DDX41-204ENST00000504807 LCTP09848 1927 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 MYADML2A6NDP7 307 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 RANBP6O60518 1105 aaKnown RBP15.56■□□□□ 0.08
DDX41-204ENST00000504807 CNTN2Q02246 1040 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 RCSD1Q6JBY9 416 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX41-204ENST00000504807 PURBQ96QR8 312 aaKnown RBP15.56■□□□□ 0.08
DDX41-204ENST00000504807 KATNBL1Q9H079 304 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 HOMER2Q9NSB8 354 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 NEDD4P46934 1319 aa15.56■□□□□ 0.08
DDX41-204ENST00000504807 SMCHD1A6NHR9 2005 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 LRRC37A2A6NM11 1700 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 ZBED4O75132 1171 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 ADAMTS4O75173 837 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 SLC3A2P08195 630 aaKnown RBP15.55■□□□□ 0.08
DDX41-204ENST00000504807 SLC16A2P36021 539 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 MUM1L1Q5H9M0 696 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 RRP12Q5JTH9 1297 aaKnown RBP15.55■□□□□ 0.08
DDX41-204ENST00000504807 MAMDC4Q6UXC1 1216 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 STAG1Q8WVM7 1258 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 NKX2-4Q9H2Z4 354 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
DDX41-204ENST00000504807 MSRAQ9UJ68 235 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 PRR12Q9ULL5 1215 aa15.55■□□□□ 0.08
DDX41-204ENST00000504807 ZMYM6O95789 1325 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 SOWAHBA6NEL2 793 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 GSPT1P15170 499 aaKnown RBP15.54■□□□□ 0.08
DDX41-204ENST00000504807 SLC1A4P43007 532 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 STAT2P52630 851 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 CCDC174Q6PII3 467 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 C16orf59Q7L2K0 433 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 TMEM47Q9BQJ4 181 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 A1CFQ9NQ94 594 aaKnown RBP15.54■□□□□ 0.08
DDX41-204ENST00000504807 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 SLC5A4Q9NY91 659 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 PHF24Q9UPV7 400 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 LAMA4Q16363 1823 aa15.54■□□□□ 0.08
DDX41-204ENST00000504807 FRMPD2Q68DX3 1309 aaPredicted RBP15.53■□□□□ 0.08
DDX41-204ENST00000504807 SYNRGQ9UMZ2 1314 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 COPB2P35606 906 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 OAZ1P54368 228 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 FAAP100Q0VG06 881 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 AAMPQ13685 434 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 RAB30Q15771 203 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 TMEM240Q5SV17 173 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 TMEM63BQ5T3F8 832 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 CWC27Q6UX04 472 aaKnown RBP15.53■□□□□ 0.08
DDX41-204ENST00000504807 SLC28A3Q9HAS3 691 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 RNF146Q9NTX7 359 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 ISY1Q9ULR0 285 aaKnown RBP15.53■□□□□ 0.08
DDX41-204ENST00000504807 MCM3APO60318 1980 aa15.53■□□□□ 0.08
DDX41-204ENST00000504807 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.52■□□□□ 0.08
DDX41-204ENST00000504807 CTAGE5O15320 804 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 TIMP1P01033 207 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 ACRP10323 421 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 CCSAPQ6IQ19 270 aaPredicted RBP15.52■□□□□ 0.08
DDX41-204ENST00000504807 ANKRD35Q8N283 1001 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 FAM133AQ8N9E0 248 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 CHST13Q8NET6 341 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 DDX11Q96FC9 970 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 ZKSCAN3Q9BRR0 538 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 CPVLQ9H3G5 476 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 TOMM22Q9NS69 142 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.52■□□□□ 0.08
DDX41-204ENST00000504807 NRBP1Q9UHY1 535 aa15.52■□□□□ 0.08
DDX41-204ENST00000504807 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.08
DDX41-204ENST00000504807 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
DDX41-204ENST00000504807 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 DCDC2CA8MYV0 355 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 PLA2G6O60733 806 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 RARBP10826 455 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 AKR1A1P14550 325 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 PPIGQ13427 754 aaKnown RBP eCLIP15.51■□□□□ 0.071e-7■■■■□ 22.6
DDX41-204ENST00000504807 RASIP1Q5U651 963 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 ARMCX2Q7L311 632 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 ZNF467Q7Z7K2 595 aaPredicted RBP15.51■□□□□ 0.07
DDX41-204ENST00000504807 FAM160B2Q86V87 743 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 CCDC144CPQ8IYA2 1237 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 GPCPD1Q9NPB8 672 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 TCP11L1Q9NUJ3 509 aa15.51■□□□□ 0.07
DDX41-204ENST00000504807 YBX2Q9Y2T7 364 aaKnown RBP15.51■□□□□ 0.07
DDX41-204ENST00000504807 PDHBP11177 359 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 ALAS1P13196 640 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 CSF2RAP15509 400 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
DDX41-204ENST00000504807 ACVR2BQ13705 512 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 CCDC96Q2M329 555 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 MFSD5Q6N075 450 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 BTNL9Q6UXG8 535 aa15.5■□□□□ 0.07
DDX41-204ENST00000504807 ZNF365Q70YC5 407 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms