RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 Q7L0L9 218 aa26.67■■□□□ 1.86
CDC42SE2-207ENST00000504701 LBHD1Q9BQE6 289 aaPredicted RBP26.67■■□□□ 1.86
CDC42SE2-207ENST00000504701 B4E1Z4 1266 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 NFIBO00712 420 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 KDM4AO75164 1064 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 DUSP11O75319 330 aaKnown RBP26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 ACLYP53396 1101 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 ZNF543Q08ER8 600 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 LRIT3Q3SXY7 679 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 BADQ92934 168 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 PRKAG2Q9UGJ0 569 aa26.66■■□□□ 1.86
CDC42SE2-207ENST00000504701 CTAGE5O15320 804 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 PQBP1O60828 265 aaKnown RBP26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 C6orf222P0C671 652 aaPredicted RBP26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 SNHG28P0DPA3 235 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 TTC22Q5TAA0 569 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 C1orf53Q5VUE5 145 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 EEPD1Q7L9B9 569 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 ESR2Q92731 530 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 RNF41Q9H4P4 317 aaPredicted RBP26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 PDGFCQ9NRA1 345 aa26.65■■□□□ 1.86
CDC42SE2-207ENST00000504701 FBXO16Q8IX29 292 aaPredicted RBP26.64■■□□□ 1.86
CDC42SE2-207ENST00000504701 DSCC1Q9BVC3 393 aa26.64■■□□□ 1.86
CDC42SE2-207ENST00000504701 HIP1O00291 1037 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 PCP11498 1178 aaKnown RBP26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 BEX3Q00994 111 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 BAATQ14032 418 aaPredicted RBP26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 C9orf50Q5SZB4 431 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 SLC30A10Q6XR72 485 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 TTC14Q96N46 770 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 TSEN34Q9BSV6 310 aaKnown RBP26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 UBA5Q9GZZ9 404 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 UPF3AQ9H1J1 476 aaKnown RBP26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 STARD7Q9NQZ5 370 aa26.63■■□□□ 1.85
CDC42SE2-207ENST00000504701 ASGR1P07306 291 aa26.62■■□□□ 1.85
CDC42SE2-207ENST00000504701 GJA9P57773 515 aa26.62■■□□□ 1.85
CDC42SE2-207ENST00000504701 CLEC4DQ8WXI8 215 aa26.62■■□□□ 1.85
CDC42SE2-207ENST00000504701 COL6A3P12111 3177 aa26.61■■□□□ 1.85
CDC42SE2-207ENST00000504701 CLTBP09497 229 aa26.61■■□□□ 1.85
CDC42SE2-207ENST00000504701 CST5P28325 142 aaPredicted RBP26.61■■□□□ 1.85
CDC42SE2-207ENST00000504701 SHHQ15465 462 aa26.61■■□□□ 1.85
CDC42SE2-207ENST00000504701 ZSWIM5Q9P217 1185 aa26.61■■□□□ 1.85
CDC42SE2-207ENST00000504701 ASB14A6NK59 587 aa26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 SMPD1P17405 629 aa26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 TNFAIP2Q03169 654 aa26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 FAAP100Q0VG06 881 aa26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 TAPT1Q6NXT6 567 aa26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 ENAHQ8N8S7 591 aaPredicted RBP26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 PNMA1Q8ND90 353 aa26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 GNEQ9Y223 722 aaKnown RBP26.6■■□□□ 1.85
CDC42SE2-207ENST00000504701 PTPDC1A2A3K4 754 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 MOXD2PA6NHM9 499 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 EPHB4P54760 987 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 IMMTQ16891 758 aaKnown RBP26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 GNASQ5JWF2 1037 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 NOL8Q76FK4 1167 aaKnown RBP26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 DGKHQ86XP1 1220 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 DEFB123Q8N688 67 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 ZSCAN10Q96SZ4 725 aaPredicted RBP26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 TAF6LQ9Y6J9 622 aa26.59■■□□□ 1.85
CDC42SE2-207ENST00000504701 CALML3P27482 149 aa26.58■■□□□ 1.85
CDC42SE2-207ENST00000504701 ALDH5A1P51649 535 aaPredicted RBP26.58■■□□□ 1.85
CDC42SE2-207ENST00000504701 PTH1RQ03431 593 aa26.58■■□□□ 1.85
CDC42SE2-207ENST00000504701 USH1GQ495M9 461 aa26.58■■□□□ 1.85
CDC42SE2-207ENST00000504701 NUP133Q8WUM0 1156 aa26.58■■□□□ 1.85
CDC42SE2-207ENST00000504701 TNKSO95271 1327 aa26.58■■□□□ 1.85
CDC42SE2-207ENST00000504701 CYB5R4Q7L1T6 521 aa26.57■■□□□ 1.84
CDC42SE2-207ENST00000504701 ANKRD33Q7Z3H0 272 aa26.57■■□□□ 1.84
CDC42SE2-207ENST00000504701 TLK2Q86UE8 772 aa26.57■■□□□ 1.84
CDC42SE2-207ENST00000504701 IQCA1Q86XH1 822 aa26.57■■□□□ 1.84
CDC42SE2-207ENST00000504701 MORC4Q8TE76 937 aa26.57■■□□□ 1.84
CDC42SE2-207ENST00000504701 KIAA0355O15063 1070 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 CHMLP26374 656 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 ANKS1AQ92625 1134 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 VTI1AQ96AJ9 217 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 KAT14Q9H8E8 782 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 SPC25Q9HBM1 224 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 TMEM39AQ9NV64 488 aa26.56■■□□□ 1.84
CDC42SE2-207ENST00000504701 MYH6P13533 1939 aa26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 DYNC1LI2O43237 492 aaPredicted RBP26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 CDK7P50613 346 aa26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 CXCL17Q6UXB2 119 aa26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 PCSK9Q8NBP7 692 aaKnown RBP26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 TBC1D5Q92609 795 aa26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 GLT1D1Q96MS3 346 aa26.55■■□□□ 1.84
CDC42SE2-207ENST00000504701 RPS6P62753 249 aaKnown RBP26.54■■□□□ 1.84
CDC42SE2-207ENST00000504701 NKX3-2P78367 333 aa26.54■■□□□ 1.84
CDC42SE2-207ENST00000504701 CDC37Q16543 378 aaPredicted RBP26.54■■□□□ 1.84
CDC42SE2-207ENST00000504701 GPATCH4Q5T3I0 446 aaKnown RBP26.54■■□□□ 1.84
CDC42SE2-207ENST00000504701 RNF207Q6ZRF8 634 aa26.54■■□□□ 1.84
CDC42SE2-207ENST00000504701 CTNNA3Q9UI47 895 aa26.54■■□□□ 1.84
CDC42SE2-207ENST00000504701 RAG1P15918 1043 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 GPR153Q6NV75 609 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 KIAA1211Q6ZU35 1233 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 ADGRF4Q8IZF3 695 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 STAG2Q8N3U4 1231 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 MTMR10Q9NXD2 777 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 ELP1O95163 1332 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 WDR19Q8NEZ3 1342 aa26.53■■□□□ 1.84
CDC42SE2-207ENST00000504701 A0A0U1RQG5 324 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms