RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 SLFN13Q68D06 897 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 FCHSD1Q86WN1 690 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 ZFPM1Q8IX07 1006 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 LARGE2Q8N3Y3 721 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 KCTD17Q8N5Z5 321 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 RASGRP4Q8TDF6 673 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 NOC3LQ8WTT2 800 aaKnown RBP11.06□□□□□ -0.64
COL1A1-210ENST00000504289 CALML4Q96GE6 196 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 NAP1L5Q96NT1 182 aaPredicted RBP11.06□□□□□ -0.64
COL1A1-210ENST00000504289 TMEM60Q9H2L4 133 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 PSTPIP2Q9H939 334 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 PYCARDQ9ULZ3 195 aa11.06□□□□□ -0.64
COL1A1-210ENST00000504289 FRMPD2Q68DX3 1309 aaPredicted RBP11.06□□□□□ -0.64
COL1A1-210ENST00000504289 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
COL1A1-210ENST00000504289 PPP1R3GB7ZBB8 358 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 H7C1D1 291 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 ADAMTS3O15072 1205 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 RHOBTB3O94955 611 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 RPN1P04843 607 aaKnown RBP11.05□□□□□ -0.64
COL1A1-210ENST00000504289 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
COL1A1-210ENST00000504289 KCNA3P22001 575 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 CYP3A7P24462 503 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 MAP3K10Q02779 954 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 SEPT2Q15019 361 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 CALCRLQ16602 461 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 FILIP1LQ4L180 1135 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 CDKAL1Q5VV42 579 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 ISM2Q6H9L7 571 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 FOXR2Q6PJQ5 311 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 TMC6Q7Z403 805 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 FILIP1Q7Z7B0 1213 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 CABP7Q86V35 215 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 ANKRD20A12PQ8NF67 263 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 PRMT6Q96LA8 375 aaPredicted RBP11.05□□□□□ -0.64
COL1A1-210ENST00000504289 C7orf25Q9BPX7 421 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 AMNQ9BXJ7 453 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 TDRD3Q9H7E2 651 aaKnown RBP11.05□□□□□ -0.64
COL1A1-210ENST00000504289 ARHGEF10LQ9HCE6 1279 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 MTMR7Q9Y216 660 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 ATF5Q9Y2D1 282 aaPredicted RBP11.05□□□□□ -0.64
COL1A1-210ENST00000504289 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
COL1A1-210ENST00000504289 ADAMTSL1Q8N6G6 1762 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 A0A1B0GTH6 734 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 PVALEFA0A1B0GWK0 134 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 F5H6K3 240 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 TBX3O15119 743 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 ATP1A3P13637 1013 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 CCZ1BP86790 482 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 CCZ1P86791 482 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 FMR1Q06787 632 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 KLRC3Q07444 240 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 TCP10Q12799 353 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 TBX2Q13207 712 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 NR1I3Q14994 352 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 NAALADL2Q58DX5 795 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 DNTTIP2Q5QJE6 756 aaKnown RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 SPECC1LQ69YQ0 1117 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 SIAH1Q8IUQ4 282 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 NIM1KQ8IY84 436 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 GRAMD1CQ8IYS0 662 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 RASSF8Q8NHQ8 419 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 ZBED3Q96IU2 234 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 MBOAT7Q96N66 472 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 CSRNP1Q96S65 589 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 BIN2Q9UBW5 565 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 ZNF70Q9UC06 446 aaPredicted RBP11.04□□□□□ -0.64
COL1A1-210ENST00000504289 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
COL1A1-210ENST00000504289 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 PSMD14O00487 310 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 BMP3P12645 472 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 DPEP1P16444 411 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 EIF6P56537 245 aaKnown RBP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 LRMPQ12912 555 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 PAK1Q13153 545 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 TNIP1Q15025 636 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 KARSQ15046 597 aaKnown RBP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 JAKMIP3Q5VZ66 844 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 SLFN12Q8IYM2 578 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 GIMAP8Q8ND71 665 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 COA7Q96BR5 231 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 MTRQ99707 1265 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 TMX1Q9H3N1 280 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
COL1A1-210ENST00000504289 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
COL1A1-210ENST00000504289 LRWD1Q9UFC0 647 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms