RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 MFSD5Q6N075 450 aa25.39■■□□□ 1.66
RNF4-205ENST00000504224 EEPD1Q7L9B9 569 aa25.39■■□□□ 1.66
RNF4-205ENST00000504224 MAFAQ8NHW3 353 aaPredicted RBP25.39■■□□□ 1.66
RNF4-205ENST00000504224 DCAF4Q8WV16 495 aa25.39■■□□□ 1.66
RNF4-205ENST00000504224 PPP1R12CQ9BZL4 782 aa25.39■■□□□ 1.66
RNF4-205ENST00000504224 AP5M1Q9H0R1 490 aa25.39■■□□□ 1.66
RNF4-205ENST00000504224 CTAGE5O15320 804 aa25.38■■□□□ 1.65
RNF4-205ENST00000504224 ORC4O43929 436 aa25.38■■□□□ 1.65
RNF4-205ENST00000504224 PPIGQ13427 754 aaKnown RBP eCLIP25.38■■□□□ 1.654e-10■■□□□ 12.4
RNF4-205ENST00000504224 ALX1Q15699 326 aa25.38■■□□□ 1.65
RNF4-205ENST00000504224 TLK2Q86UE8 772 aa25.38■■□□□ 1.65
RNF4-205ENST00000504224 FAM227BQ96M60 508 aa25.38■■□□□ 1.65
RNF4-205ENST00000504224 CYP39A1Q9NYL5 469 aa25.38■■□□□ 1.65
RNF4-205ENST00000504224 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.37■■□□□ 1.65
RNF4-205ENST00000504224 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.37■■□□□ 1.65
RNF4-205ENST00000504224 SLC16A2P36021 539 aa25.37■■□□□ 1.65
RNF4-205ENST00000504224 MCMDC2Q4G0Z9 681 aa25.37■■□□□ 1.65
RNF4-205ENST00000504224 TTBK2Q6IQ55 1244 aa25.37■■□□□ 1.65
RNF4-205ENST00000504224 CXCL17Q6UXB2 119 aa25.37■■□□□ 1.65
RNF4-205ENST00000504224 FBXO16Q8IX29 292 aaPredicted RBP25.37■■□□□ 1.65
RNF4-205ENST00000504224 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.37■■□□□ 1.652e-6■■□□□ 11.6
RNF4-205ENST00000504224 ASTN1O14525 1302 aa25.37■■□□□ 1.65
RNF4-205ENST00000504224 A0A0D9SFI3 127 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 DYNC1LI2O43237 492 aaPredicted RBP25.36■■□□□ 1.65
RNF4-205ENST00000504224 FGAP02671 866 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 FOSL2P15408 326 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 FAM126BQ8IXS8 530 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 TMEM199Q8N511 208 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 PURBQ96QR8 312 aaKnown RBP25.36■■□□□ 1.65
RNF4-205ENST00000504224 GPCPD1Q9NPB8 672 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 PDGFCQ9NRA1 345 aa25.36■■□□□ 1.65
RNF4-205ENST00000504224 FRMPD2Q68DX3 1309 aaPredicted RBP25.36■■□□□ 1.65
RNF4-205ENST00000504224 TMEM265A0A087WTH1 108 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 ICAM1P05362 532 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 TOP1P11387 765 aaKnown RBP25.35■■□□□ 1.65
RNF4-205ENST00000504224 CSF2RAP15509 400 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 SMPD1P17405 629 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 PTGS1P23219 599 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 NKX3-2P78367 333 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 FSCN1Q16658 493 aaKnown RBP25.35■■□□□ 1.65
RNF4-205ENST00000504224 SYDE2Q5VT97 1194 aa25.35■■□□□ 1.65
RNF4-205ENST00000504224 COL25A1Q9BXS0 654 aaPredicted RBP25.35■■□□□ 1.65
RNF4-205ENST00000504224 GNEQ9Y223 722 aaKnown RBP25.35■■□□□ 1.65
RNF4-205ENST00000504224 TRIM6-TRIM34B2RNG4 842 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 ZEB2O60315 1214 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 FGRP09769 529 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 DNAJB2P25686 324 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 NOVP48745 357 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 HAND2P61296 217 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 HDAC1Q13547 482 aaPredicted RBP25.34■■□□□ 1.65
RNF4-205ENST00000504224 IQSEC1Q6DN90 963 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 TMEM47Q9BQJ4 181 aa25.34■■□□□ 1.65
RNF4-205ENST00000504224 RANBP17Q9H2T7 1088 aaKnown RBP25.34■■□□□ 1.65
RNF4-205ENST00000504224 CABYRO75952 493 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 ACRP10323 421 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 HSPD1P10809 573 aaKnown RBP25.33■■□□□ 1.65
RNF4-205ENST00000504224 CYP2C18P33260 490 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 NMIQ13287 307 aaPredicted RBP25.33■■□□□ 1.65
RNF4-205ENST00000504224 BAATQ14032 418 aaPredicted RBP25.33■■□□□ 1.65
RNF4-205ENST00000504224 TMEM240Q5SV17 173 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 KIAA1211Q6ZU35 1233 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 RILPL2Q969X0 211 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 LNPKQ9C0E8 428 aa25.33■■□□□ 1.65
RNF4-205ENST00000504224 ITGA7Q13683 1181 aa25.32■■□□□ 1.64
RNF4-205ENST00000504224 TAPT1Q6NXT6 567 aa25.32■■□□□ 1.64
RNF4-205ENST00000504224 BTNL9Q6UXG8 535 aa25.32■■□□□ 1.64
RNF4-205ENST00000504224 C16orf59Q7L2K0 433 aa25.32■■□□□ 1.64
RNF4-205ENST00000504224 ZNF589Q86UQ0 364 aaPredicted RBP25.32■■□□□ 1.64
RNF4-205ENST00000504224 VTA1Q9NP79 307 aa25.32■■□□□ 1.64
RNF4-205ENST00000504224 ADD3Q9UEY8 706 aaKnown RBP25.32■■□□□ 1.64
RNF4-205ENST00000504224 PTPDC1A2A3K4 754 aa25.31■■□□□ 1.64
RNF4-205ENST00000504224 NFIBO00712 420 aa25.31■■□□□ 1.64
RNF4-205ENST00000504224 CD4P01730 458 aa25.31■■□□□ 1.64
RNF4-205ENST00000504224 GRIN2CQ14957 1233 aa25.31■■□□□ 1.64
RNF4-205ENST00000504224 TMEM63BQ5T3F8 832 aa25.31■■□□□ 1.64
RNF4-205ENST00000504224 TIFAQ96CG3 184 aa25.31■■□□□ 1.64
RNF4-205ENST00000504224 PSRC1Q6PGN9 363 aaPredicted RBP25.3■■□□□ 1.64
RNF4-205ENST00000504224 ZNF365Q70YC5 407 aa25.3■■□□□ 1.64
RNF4-205ENST00000504224 HIPK3Q9H422 1215 aa25.3■■□□□ 1.64
RNF4-205ENST00000504224 TCP11L1Q9NUJ3 509 aa25.3■■□□□ 1.64
RNF4-205ENST00000504224 CCDC171Q6TFL3 1326 aa25.3■■□□□ 1.64
RNF4-205ENST00000504224 GRXCR1A8MXD5 290 aa25.29■■□□□ 1.64
RNF4-205ENST00000504224 ALDH5A1P51649 535 aaPredicted RBP25.29■■□□□ 1.64
RNF4-205ENST00000504224 PSMC6P62333 389 aa25.29■■□□□ 1.64
RNF4-205ENST00000504224 MFSD6Q6ZSS7 791 aa25.29■■□□□ 1.64
RNF4-205ENST00000504224 SLC43A3Q8NBI5 491 aa25.29■■□□□ 1.64
RNF4-205ENST00000504224 RWDD1Q9H446 243 aaPredicted RBP25.29■■□□□ 1.64
RNF4-205ENST00000504224 ZNF576Q9H609 170 aa25.29■■□□□ 1.64
RNF4-205ENST00000504224 Q9Y3F1 56 aa25.29■■□□□ 1.64
RNF4-205ENST00000504224 UNC80Q8N2C7 3258 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 PDHBP11177 359 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 CALML3P27482 149 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 B4GALNT3Q6L9W6 998 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 MORC4Q8TE76 937 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 TRPV6Q9H1D0 765 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 IL23AQ9NPF7 189 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 SUPT16HQ9Y5B9 1047 aaKnown RBP25.28■■□□□ 1.64
RNF4-205ENST00000504224 GRIN2DO15399 1336 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 ZMYM6O95789 1325 aa25.28■■□□□ 1.64
RNF4-205ENST00000504224 LRRC37A2A6NM11 1700 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms