RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CLASP2O75122 1294 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SYF2O95926 243 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 GLI1P08151 1106 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 IL2RBP14784 551 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 UBASH3AP57075 661 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 UBE2HP62256 183 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ZNF423Q2M1K9 1284 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MTHFSDQ2M296 383 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 TAOK1Q7L7X3 1001 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 UBE3BQ7Z3V4 1068 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MAATS1Q7Z4T9 603 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 IQCA1Q86XH1 822 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ANKRD13AQ8IZ07 590 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC148Q8NFR7 591 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ATRIPQ8WXE1 791 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ASIC4Q96FT7 647 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 NAPBQ9H115 298 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ALDH8A1Q9H2A2 487 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MMRN2Q9H8L6 949 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ATP6V0A4Q9HBG4 840 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 PCDH18Q9HCL0 1135 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 LZTFL1Q9NQ48 299 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MBIPQ9NS73 344 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 WDR35Q9P2L0 1181 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 FBXO9Q9UK97 447 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CROTQ9UKG9 612 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 WWC3Q9ULE0 1092 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 NSD2O96028 1365 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SCN11AQ9UI33 1791 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 FRMD3A2A2Y4 597 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 B4DLN1 442 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 N4BP3O15049 544 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 FBXO21O94952 628 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 FGFR1OPO95684 399 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CSE1LP55060 971 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ARID5AQ03989 594 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ITIH3Q06033 890 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 KCNA1Q09470 495 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 KRT32Q14532 448 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ARHGEF6Q15052 776 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 RBBP5Q15291 538 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ALDH1L2Q3SY69 923 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 TTC22Q5TAA0 569 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 PDXDC1Q6P996 788 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 TPTE2Q6XPS3 522 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 KIF6Q6ZMV9 814 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 NEK10Q6ZWH5 1172 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CEP57Q86XR8 500 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 LARGE2Q8N3Y3 721 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 C8orf58Q8NAV2 365 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 RBM46Q8TBY0 533 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 NCSTNQ92542 709 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CAPZA3Q96KX2 299 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 TTC14Q96N46 770 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 PLVAPQ9BX97 442 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 RSPH9Q9H1X1 276 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC68Q9H2F9 335 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MRPL46Q9H2W6 279 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ZWILCHQ9H900 591 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 CORO1CQ9ULV4 474 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MYO6Q9UM54 1294 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 FAN1Q9Y2M0 1017 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MRFAP1Q9Y605 127 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 PARD3Q8TEW0 1356 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 C5P01031 1676 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 UBR2Q8IWV8 1755 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 EP400Q96L91 3159 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MYPNQ86TC9 1320 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SMIM23A6NLE4 172 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 GNAT3A8MTJ3 354 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ZNF213O14771 459 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ZSCAN22P10073 491 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 PAFAH1B1P43034 410 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 MTIF2P46199 727 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 COBLL1Q53SF7 1204 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SLC2A7Q6PXP3 512 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 GIGYF2Q6Y7W6 1299 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 RSRC2Q7L4I2 434 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 ZNF713Q8N859 430 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 APPL2Q8NEU8 664 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SGCDQ92629 289 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SPDL1Q96EA4 605 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 NEK1Q96PY6 1258 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 HINFPQ9BQA5 517 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 EHD4Q9H223 541 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 LGR6Q9HBX8 967 aa4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 LUC7LQ9NQ29 371 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 BMP2KQ9NSY1 1161 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 DDX19AQ9NUU7 478 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.08□□□□□ -1.76
PCDH11X-208ENST00000504220 SGTAO43765 313 aa4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 LGR5O75473 907 aa4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 PENKP01210 267 aaPredicted RBP4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 SRGNP10124 158 aa4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 POLD2P49005 469 aa4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 PDE1AP54750 535 aa4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 SMC1AQ14683 1233 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 MYLK3Q32MK0 819 aa4.07□□□□□ -1.76
PCDH11X-208ENST00000504220 NCCRP1Q6ZVX7 275 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms