RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FAM50BQ9Y247 325 aa15.23■□□□□ 0.03
LSM6-204ENST00000504181 KMT2BQ9UMN6 2715 aaPredicted RBP15.23■□□□□ 0.03
LSM6-204ENST00000504181 GREB1LQ9C091 1923 aaPredicted RBP15.22■□□□□ 0.03
LSM6-204ENST00000504181 RAD21O60216 631 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 ZEB2O60315 1214 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 ERVK-21P61565 698 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
LSM6-204ENST00000504181 MAGEB6Q8N7X4 407 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 PBXIP1Q96AQ6 731 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 TEX13BQ9BXU2 312 aa15.22■□□□□ 0.03
LSM6-204ENST00000504181 GNEQ9Y223 722 aaKnown RBP15.22■□□□□ 0.03
LSM6-204ENST00000504181 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
LSM6-204ENST00000504181 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
LSM6-204ENST00000504181 BAIAP3O94812 1187 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 SUPT20HL2P0C7V6 817 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 AKR1B1P15121 316 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 WDR5P61964 334 aaKnown RBP15.21■□□□□ 0.03
LSM6-204ENST00000504181 FAM83BQ5T0W9 1011 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 BMP8AQ7Z5Y6 402 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 CERS3Q8IU89 383 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 SUGP1Q8IWZ8 645 aaKnown RBP15.21■□□□□ 0.03
LSM6-204ENST00000504181 ANKRD35Q8N283 1001 aa15.21■□□□□ 0.03
LSM6-204ENST00000504181 ATOH1Q92858 354 aaPredicted RBP15.21■□□□□ 0.03
LSM6-204ENST00000504181 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 TMEM221A6NGB7 291 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 M0R296 226 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 IQCF3P0C7M6 154 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 DEFB103AP81534 67 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 CCDC158Q5M9N0 1113 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 RNF135Q8IUD6 432 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 EDAQ92838 391 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 MEIS3Q99687 375 aa15.2■□□□□ 0.02
LSM6-204ENST00000504181 DMXL1Q9Y485 3027 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 SOWAHBA6NEL2 793 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 KRT37O76014 449 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 SMPD1P17405 629 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 RETREG2Q8NC44 543 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 FBXO22Q8NEZ5 403 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.19■□□□□ 0.02
LSM6-204ENST00000504181 PPP1R13LQ8WUF5 828 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 CRBNQ96SW2 442 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
LSM6-204ENST00000504181 CYP2D6P10635 497 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 ID4P47928 161 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 CNTN2Q02246 1040 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 FAM47CQ5HY64 1035 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 TMEM63BQ5T3F8 832 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 ASCL5Q7RTU5 278 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
LSM6-204ENST00000504181 MRPL38Q96DV4 380 aaKnown RBP15.18■□□□□ 0.02
LSM6-204ENST00000504181 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 C17orf80Q9BSJ5 609 aa15.18■□□□□ 0.02
LSM6-204ENST00000504181 ALG13Q9NP73 1137 aaKnown RBP15.18■□□□□ 0.02
LSM6-204ENST00000504181 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 EEF2P13639 858 aaKnown RBP15.17■□□□□ 0.02
LSM6-204ENST00000504181 CLUL1Q15846 466 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 PKN1Q16512 942 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 FAM117BQ6P1L5 589 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 FBXL6Q8N531 539 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
LSM6-204ENST00000504181 POP1Q99575 1024 aaKnown RBP15.17■□□□□ 0.02
LSM6-204ENST00000504181 RAD9AQ99638 391 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 SLF1Q9BQI6 1058 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 PDGFCQ9NRA1 345 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 CLDND1Q9NY35 253 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
LSM6-204ENST00000504181 MYH7P12883 1935 aa15.17■□□□□ 0.02
LSM6-204ENST00000504181 EPG5Q9HCE0 2579 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 IGSF3O75054 1194 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 GJB5O95377 273 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 VCPP55072 806 aaKnown RBP15.16■□□□□ 0.02
LSM6-204ENST00000504181 G3BP1Q13283 466 aaKnown RBP eCLIP15.16■□□□□ 0.02
LSM6-204ENST00000504181 TIGD5Q53EQ6 642 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 TCEAL5Q5H9L2 206 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
LSM6-204ENST00000504181 RAVER2Q9HCJ3 691 aaKnown RBP15.16■□□□□ 0.02
LSM6-204ENST00000504181 SWAP70Q9UH65 585 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 CACNA1GO43497 2377 aa15.16■□□□□ 0.02
LSM6-204ENST00000504181 H0Y858 1186 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 RGS20O76081 388 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 MYL3P08590 195 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.15■□□□□ 0.02
LSM6-204ENST00000504181 EEPD1Q7L9B9 569 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 TLR9Q9NR96 1032 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 CTNNA3Q9UI47 895 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 CTDP1Q9Y5B0 961 aaPredicted RBP15.15■□□□□ 0.02
LSM6-204ENST00000504181 ZNF292O60281 2723 aa15.15■□□□□ 0.02
LSM6-204ENST00000504181 RBAK-RBAKDNI3L0D1 243 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 PURAQ00577 322 aaKnown RBP15.14■□□□□ 0.01
LSM6-204ENST00000504181 MTX1Q13505 466 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 SMAD2Q15796 467 aaKnown RBP15.14■□□□□ 0.01
LSM6-204ENST00000504181 PTPROQ16827 1216 aa15.14■□□□□ 0.01
LSM6-204ENST00000504181 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms