RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 DIRC2Q96SL1 478 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 EPB41L4BQ9H329 900 aa4.79□□□□□ -1.64
ATXN3-208ENST00000504047 NSUN3Q9H649 340 aaKnown RBP4.79□□□□□ -1.64
ATXN3-208ENST00000504047 NPHP3-ACAD11A0A0J9YXS1 232 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 IQCA1LA6NCM1 817 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-208ENST00000504047 PRKCAP17252 672 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 L1CAMP32004 1257 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 CORO7P57737 925 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 CYP4F8P98187 520 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 SCRN1Q12765 414 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 ADGRF1Q5T601 910 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 GTF2IRD2BQ6EKJ0 949 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
ATXN3-208ENST00000504047 PRR23BQ6ZRT6 265 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 GTF2IRD2Q86UP8 949 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 FBXO15Q8NCQ5 510 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-208ENST00000504047 TMEM52Q8NDY8 209 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 FAM84AQ96KN4 292 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 CCDC140Q96MF4 163 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 NKX2-4Q9H2Z4 354 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 DCP1AQ9NPI6 582 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-208ENST00000504047 CYP26B1Q9NR63 512 aa4.78□□□□□ -1.64
ATXN3-208ENST00000504047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-208ENST00000504047 NOTOA8MTQ0 251 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 CPP00450 1065 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 MPOP05164 745 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 ITGAVP06756 1048 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 HOXC12P31275 282 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 TMEM62Q0P6H9 643 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 PKN1Q16512 942 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 SLC10A6Q3KNW5 377 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 OLFML2BQ68BL8 750 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 ZNF227Q86WZ6 799 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 POU5F2Q8N7G0 328 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 ST13P5Q8NFI4 369 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-208ENST00000504047 SREK1Q8WXA9 508 aaKnown RBP4.77□□□□□ -1.65
ATXN3-208ENST00000504047 SHISA4Q96DD7 197 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 MRGPRX3Q96LB0 322 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 JMJD8Q96S16 334 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 PPP1R16BQ96T49 567 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 MCMBPQ9BTE3 642 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 SIRPGQ9P1W8 387 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 IMPACTQ9P2X3 320 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 ACSL6Q9UKU0 697 aa4.77□□□□□ -1.65
ATXN3-208ENST00000504047 ABLIM1O14639 778 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 SNRPB2P08579 225 aaKnown RBP4.76□□□□□ -1.65
ATXN3-208ENST00000504047 KCNJ6P48051 423 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 GALK1P51570 392 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 IQCEQ6IPM2 695 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 LRRC47Q8N1G4 583 aaKnown RBP4.76□□□□□ -1.65
ATXN3-208ENST00000504047 BTN2A2Q8WVV5 523 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 COPS5Q92905 334 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 ZNF669Q96BR6 464 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-208ENST00000504047 SGSM3Q96HU1 749 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 SLC26A8Q96RN1 970 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 PLCD4Q9BRC7 762 aa4.76□□□□□ -1.65
ATXN3-208ENST00000504047 HRKO00198 91 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 PDPK1O15530 556 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 NPHS1O60500 1241 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 RBL2Q08999 1139 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 HSP90AA2PQ14568 343 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-208ENST00000504047 E4F1Q66K89 784 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-208ENST00000504047 TMEM132EQ6IEE7 984 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 ZNF605Q86T29 641 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 CABP7Q86V35 215 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 BHLHE22Q8NFJ8 381 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-208ENST00000504047 NLGN2Q8NFZ4 835 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 LGR4Q9BXB1 951 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 GPRC5CQ9NQ84 441 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 PDLIM7Q9NR12 457 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 CLEC1BQ9P126 229 aa4.75□□□□□ -1.65
ATXN3-208ENST00000504047 CCDC85CA6NKD9 419 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 MEFVO15553 781 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-208ENST00000504047 TBX1O43435 398 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 PEX10O60683 326 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 SCG5P05408 212 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 THBDP07204 575 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 TMEM253P0C7T8 217 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 PLS3P13797 630 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 ECI1P42126 302 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 CEBPAP49715 358 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-208ENST00000504047 ERVFRD-1P60508 538 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 PPP2R2AP63151 447 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 MVKQ03426 396 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 IFRD2Q12894 506 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-208ENST00000504047 RASGRF1Q13972 1273 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 NR1I3Q14994 352 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 MTERF2Q49AM1 385 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 ZNF648Q5T619 568 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-208ENST00000504047 BICRALQ6AI39 1079 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 SYDE1Q6ZW31 735 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-208ENST00000504047 CPNE8Q86YQ8 564 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 PMFBP1Q8TBY8 1022 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 USP33Q8TEY7 942 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 DRC1Q96MC2 740 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 MMP19Q99542 508 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 CCDC113Q9H0I3 377 aa4.74□□□□□ -1.65
ATXN3-208ENST00000504047 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms