RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 GTF2IRD2BQ6EKJ0 949 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 GTF2IRD2Q86UP8 949 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 CERS3Q8IU89 383 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 MFSD2AQ8NA29 543 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 PHLDB1Q86UU1 1377 aa6.53□□□□□ -1.36
SCLT1-206ENST00000503565 A0A087WZG4 1122 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 EPHB1P54762 984 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 RNF4P78317 190 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 MCL1Q07820 350 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 SNW1Q13573 536 aaKnown RBP6.52□□□□□ -1.37
SCLT1-206ENST00000503565 LRRC41Q15345 812 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 TMEM145Q8NBT3 493 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 C8orf48Q96LL4 319 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 MIPEPQ99797 713 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 TCEAL9Q9UHQ7 104 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 FHOD1Q9Y613 1164 aa6.52□□□□□ -1.37
SCLT1-206ENST00000503565 ASXL2Q76L83 1435 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 TSPAN6O43657 245 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 OPA1O60313 960 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 KPNA6O60684 536 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 EFCAB14O75071 495 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 RASGRP1O95267 797 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 ASLP04424 464 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 NEK4P51957 841 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 GP2P55259 537 aaKnown RBP6.51□□□□□ -1.37
SCLT1-206ENST00000503565 MAP4K2Q12851 820 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 MTMR1Q13613 665 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 STAT4Q14765 748 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 DHCR24Q15392 516 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 NBPF9Q3BBW0 867 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 SLC35F1Q5T1Q4 408 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 POMZP3Q6PJE2 187 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 SPRED2Q7Z698 418 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 AHI1Q8N157 1196 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 SYTL5Q8TDW5 730 aaPredicted RBP6.51□□□□□ -1.37
SCLT1-206ENST00000503565 FBXL18Q96ME1 805 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 PRDM14Q9GZV8 571 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 NOL6Q9H6R4 1146 aaKnown RBP6.51□□□□□ -1.37
SCLT1-206ENST00000503565 BSDC1Q9NW68 430 aaPredicted RBP6.51□□□□□ -1.37
SCLT1-206ENST00000503565 PCDHB12Q9Y5F1 795 aa6.51□□□□□ -1.37
SCLT1-206ENST00000503565 TCRBV16S1A1N1A0A5B0 115 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 PRR33A8MZF0 331 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 GPR39O43194 453 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 NPTXRO95502 500 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 JMJD7P0C870 316 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 BNIP3Q12983 259 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 PRSS53Q2L4Q9 553 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 DENND5AQ6IQ26 1287 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 NECAB2Q7Z6G3 386 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 CCDC146Q8IYE0 955 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 CRACR2BQ8N4Y2 399 aaPredicted RBP6.5□□□□□ -1.37
SCLT1-206ENST00000503565 FIBCD1Q8N539 461 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 WDR66Q8TBY9 1149 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 BCL7CQ8WUZ0 217 aaPredicted RBP6.5□□□□□ -1.37
SCLT1-206ENST00000503565 RNF141Q8WVD5 230 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 KCTD13Q8WZ19 329 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 PTPRN2Q92932 1015 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 ASPNQ9BXN1 380 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 TRIM8Q9BZR9 551 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 SLC5A4Q9NY91 659 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 FBXL21Q9UKT6 434 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 TRAF6Q9Y4K3 522 aa6.5□□□□□ -1.37
SCLT1-206ENST00000503565 SHTN1A0MZ66 631 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 IGF2BP3O00425 579 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 PRC1O43663 620 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 LRRN2O75325 713 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 PEX14O75381 377 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 WNT11O96014 354 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 SCG5P05408 212 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 SNRPB2P08579 225 aaKnown RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 CPEP16870 476 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 HOXC12P31275 282 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 IGFALSP35858 605 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 CD96P40200 585 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 GRB10Q13322 594 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 NKPD1Q17RQ9 610 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 NOL9Q5SY16 702 aaKnown RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 ZNF574Q6ZN55 896 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 WDR75Q8IWA0 830 aaKnown RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 CCDC8Q9H0W5 538 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 MKNK2Q9HBH9 465 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 PAK6Q9NQU5 681 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 GFOD1Q9NXC2 390 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 DIS3Q9Y2L1 958 aaKnown RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 GPR55Q9Y2T6 319 aaPredicted RBP6.49□□□□□ -1.37
SCLT1-206ENST00000503565 RIPOR2Q9Y4F9 1068 aa6.49□□□□□ -1.37
SCLT1-206ENST00000503565 VAMP4O75379 141 aa6.48□□□□□ -1.37
SCLT1-206ENST00000503565 CRTAMO95727 393 aa6.48□□□□□ -1.37
SCLT1-206ENST00000503565 KCNA6P17658 529 aa6.48□□□□□ -1.37
SCLT1-206ENST00000503565 KCNJ6P48051 423 aa6.48□□□□□ -1.37
SCLT1-206ENST00000503565 RAB27AP51159 221 aa6.48□□□□□ -1.37
SCLT1-206ENST00000503565 PPP2R5AQ15172 486 aa6.48□□□□□ -1.37
SCLT1-206ENST00000503565 SKOR2Q2VWA4 1001 aaPredicted RBP6.48□□□□□ -1.37
SCLT1-206ENST00000503565 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms