RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 CCDC96Q2M329 555 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 SNRNP48Q6IEG0 339 aaKnown RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 CNKSR3Q6P9H4 555 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 APPBP2Q92624 585 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 ALDH8A1Q9H2A2 487 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 SLC28A3Q9HAS3 691 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 TLR7Q9NYK1 1049 aaKnown RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 PQBP1O60828 265 aaKnown RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 ICAM1P05362 532 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 ALADP13716 330 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 HTRA4P83105 476 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 CCDC178Q5BJE1 867 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 RPAINQ86UA6 219 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 AACSQ86V21 672 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 LRFN3Q9BTN0 628 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 RWDD3Q9Y3V2 267 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 EMSYQ7Z589 1322 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 TRIOBPQ9H2D6 2365 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 SOWAHBA6NEL2 793 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 OS9Q13438 667 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-210ENST00000503258 FAM83BQ5T0W9 1011 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 FAM9BQ8IZU0 186 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 ANTXR1Q9H6X2 564 aa9.22□□□□□ -0.93
PDE4D-210ENST00000503258 MICAL3Q7RTP6 2002 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 C5orf67F2Z3F1 127 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 PEX10O60683 326 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 PGK1P00558 417 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 BMP3P12645 472 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 CSF2RAP15509 400 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 PURAQ00577 322 aaKnown RBP9.21□□□□□ -0.93
PDE4D-210ENST00000503258 FOXK2Q01167 660 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 NAALADL2Q58DX5 795 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 BRDTQ58F21 947 aaPredicted RBP9.21□□□□□ -0.93
PDE4D-210ENST00000503258 TMEM67Q5HYA8 995 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 PRAMEF19Q5SWL8 479 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 TLK2Q86UE8 772 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 MIGA1Q8NAN2 632 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 ANKS1AQ92625 1134 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 DDX11Q96FC9 970 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.93
PDE4D-210ENST00000503258 MYADML2A6NDP7 307 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 KIF28PB7ZC32 967 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 HERC6Q8IVU3 1022 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 KBTBD3Q8NAB2 608 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 NEK9Q8TD19 979 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 HLA-CQ95604 372 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 IWS1Q96ST2 819 aa9.21□□□□□ -0.94
PDE4D-210ENST00000503258 SMCHD1A6NHR9 2005 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 GSG1L2A8MUP6 293 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
PDE4D-210ENST00000503258 HAS3O00219 553 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 ADCY6O43306 1168 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 SNHG28P0DPA3 235 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 ATP2A2P16615 1042 aaKnown RBP9.2□□□□□ -0.94
PDE4D-210ENST00000503258 TIGD5Q53EQ6 642 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 FAM26DQ5JW98 314 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 PPP2R2DQ66LE6 453 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 KCNV1Q6PIU1 500 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 TTC14Q96N46 770 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 ZBTB40Q9NUA8 1239 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 CYP39A1Q9NYL5 469 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 B4GALT4O60513 344 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 LPXNO60711 386 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 MBD4O95243 580 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 STAT2P52630 851 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 TAP1Q03518 808 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 PTK7Q13308 1070 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 BORCS6Q96GS4 357 aa9.2□□□□□ -0.94
PDE4D-210ENST00000503258 MPHOSPH10O00566 681 aaKnown RBP9.19□□□□□ -0.94
PDE4D-210ENST00000503258 IQCF3P0C7M6 154 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 SMPD1P17405 629 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 WDR78Q5VTH9 848 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 KATNAL1Q9BW62 490 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 PRDM12Q9H4Q4 367 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 A1CFQ9NQ94 594 aaKnown RBP9.19□□□□□ -0.94
PDE4D-210ENST00000503258 MCM3APO60318 1980 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 RB1P06400 928 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 LRRC47Q8N1G4 583 aaKnown RBP9.19□□□□□ -0.94
PDE4D-210ENST00000503258 APBB2Q92870 758 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 CCDC8Q9H0W5 538 aaPredicted RBP9.19□□□□□ -0.94
PDE4D-210ENST00000503258 FRMPD4Q14CM0 1322 aa9.19□□□□□ -0.94
PDE4D-210ENST00000503258 PGK2P07205 417 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 IFIT2P09913 472 aaKnown RBP9.18□□□□□ -0.94
PDE4D-210ENST00000503258 PBX2P40425 430 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 PDE4BQ07343 736 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 ZYXQ15942 572 aaKnown RBP9.18□□□□□ -0.94
PDE4D-210ENST00000503258 TRIM71Q2Q1W2 868 aaKnown RBP9.18□□□□□ -0.94
PDE4D-210ENST00000503258 FERMT2Q96AC1 680 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 ARMT1Q9H993 441 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 C11orf16Q9NQ32 467 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 SQORQ9Y6N5 450 aa9.18□□□□□ -0.94
PDE4D-210ENST00000503258 RNF113AO15541 343 aaKnown RBP9.18□□□□□ -0.94
PDE4D-210ENST00000503258 C6orf222P0C671 652 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms