RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 BICDL2A1A5D9 508 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 PDE2AO00408 941 aaPredicted RBP27.36■■□□□ 1.97
DDX41-202ENST00000503078 LAD1O00515 517 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 IQCEQ6IPM2 695 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 FAM114A1Q8IWE2 563 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 CNOT6LQ96LI5 555 aaKnown RBP27.36■■□□□ 1.97
DDX41-202ENST00000503078 CUEDC2Q9H467 287 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 MAGEF1Q9HAY2 307 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 MINPP1Q9UNW1 487 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 NRAPQ86VF7 1730 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 ZNF185O15231 689 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 ZMYND10O75800 440 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 ADAMTS2O95450 1211 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 CDK17Q00537 523 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 INF2Q27J81 1249 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 LRRC15Q8TF66 581 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 CRACR2AQ9BSW2 395 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 DUSP10Q9Y6W6 482 aa27.36■■□□□ 1.97
DDX41-202ENST00000503078 KIF5AQ12840 1032 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 TMED8Q6PL24 325 aaPredicted RBP27.35■■□□□ 1.97
DDX41-202ENST00000503078 STAG2Q8N3U4 1231 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 DAGLBQ8NCG7 672 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 CCDC47Q96A33 483 aaKnown RBP27.35■■□□□ 1.97
DDX41-202ENST00000503078 PCMTD1Q96MG8 357 aaPredicted RBP27.35■■□□□ 1.97
DDX41-202ENST00000503078 SELENOOQ9BVL4 669 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 JADE2Q9NQC1 790 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 RSPH14Q9UHP6 348 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 KIAA1551Q9HCM1 1747 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 PRPHP41219 470 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 VAV2P52735 878 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 FIGNQ5HY92 759 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 ANKRD40Q6AI12 368 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 FBXO33Q7Z6M2 555 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 SECISBP2LQ93073 1101 aaKnown RBP27.35■■□□□ 1.97
DDX41-202ENST00000503078 TSGA10Q9BZW7 698 aa27.35■■□□□ 1.97
DDX41-202ENST00000503078 THRAP3Q9Y2W1 955 aaKnown RBP27.35■■□□□ 1.97
DDX41-202ENST00000503078 A0A1W2PQJ5 194 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 MACROD2A1Z1Q3 448 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 MYBL2P10244 700 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 MTIF2P46199 727 aaKnown RBP27.34■■□□□ 1.97
DDX41-202ENST00000503078 CYP27A1Q02318 531 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 GALNT17Q6IS24 598 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 DGKHQ86XP1 1220 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 PNMA1Q8ND90 353 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 GDAP1L1Q96MZ0 367 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 NUTM2BA6NNL0 878 aaPredicted RBP27.34■■□□□ 1.97
DDX41-202ENST00000503078 NUTM2EB1AL46 878 aaPredicted RBP27.34■■□□□ 1.97
DDX41-202ENST00000503078 GGCXP38435 758 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 C3orf67Q6ZVT6 689 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 FNBP4Q8N3X1 1017 aaPredicted RBP27.34■■□□□ 1.97
DDX41-202ENST00000503078 RIN2Q8WYP3 895 aaPredicted RBP27.34■■□□□ 1.97
DDX41-202ENST00000503078 EEF2KMTQ96G04 330 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 ERGIC2Q96RQ1 377 aa27.34■■□□□ 1.97
DDX41-202ENST00000503078 NOC4LQ9BVI4 516 aaKnown RBP27.34■■□□□ 1.97
DDX41-202ENST00000503078 PDE4DQ08499 809 aa27.33■■□□□ 1.97
DDX41-202ENST00000503078 SF3B3Q15393 1217 aaKnown RBP27.33■■□□□ 1.97
DDX41-202ENST00000503078 MIIPQ5JXC2 388 aa27.33■■□□□ 1.97
DDX41-202ENST00000503078 ZSCAN29Q8IWY8 852 aaPredicted RBP27.33■■□□□ 1.97
DDX41-202ENST00000503078 GSPT2Q8IYD1 628 aaKnown RBP27.33■■□□□ 1.97
DDX41-202ENST00000503078 SMARCC1Q92922 1105 aaPredicted RBP27.33■■□□□ 1.97
DDX41-202ENST00000503078 PPFIA4O75335 1185 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 PLCG1P19174 1290 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 GNAQP50148 359 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 TFAP4Q01664 338 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 C2orf54Q08AI8 447 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 GRM4Q14833 912 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 CCDC70Q6NSX1 233 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 TRIM9Q9C026 710 aa27.33■■□□□ 1.96
DDX41-202ENST00000503078 FLT1P17948 1338 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 TAF1P21675 1872 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 PPP1R2P41236 205 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 DDB1Q16531 1140 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 ERFEQ4G0M1 354 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 CABP7Q86V35 215 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 CCDC42Q96M95 316 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 IL17RBQ9NRM6 502 aa27.32■■□□□ 1.96
DDX41-202ENST00000503078 AGPSO00116 658 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 SPA17Q15506 151 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 CCDC178Q5BJE1 867 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 AK8Q96MA6 479 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 TCP11L1Q9NUJ3 509 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 MAD2L2Q9UI95 211 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 SNX12Q9UMY4 172 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 STK4Q13043 487 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 TRIM58Q8NG06 486 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 ANKS1AQ92625 1134 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 IQCDQ96DY2 449 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 MCM9Q9NXL9 1143 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 LRWD1Q9UFC0 647 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 ZNF652Q9Y2D9 606 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 JRKLQ9Y4A0 524 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 MYH1P12882 1939 aa27.31■■□□□ 1.96
DDX41-202ENST00000503078 ZNF263O14978 683 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 MAGEA9P43362 315 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 FKBP15Q5T1M5 1219 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 HEATR3Q7Z4Q2 680 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 MMGT1Q8N4V1 131 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 C7orf25Q9BPX7 421 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 FAM184BQ9ULE4 1060 aa27.3■■□□□ 1.96
DDX41-202ENST00000503078 LOC102724428A0A0B4J2F2 783 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms