RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 TSEN34Q9BSV6 310 aaKnown RBP12.69□□□□□ -0.38
SNCA-207ENST00000502987 ABHD16BQ9H3Z7 469 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 STARD7Q9NQZ5 370 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 HELLSQ9NRZ9 838 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 RNF146Q9NTX7 359 aa12.69□□□□□ -0.38
SNCA-207ENST00000502987 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 TRIM43BA6NCK2 446 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 NMT2O60551 498 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 DUSP11O75319 330 aaKnown RBP12.68□□□□□ -0.38
SNCA-207ENST00000502987 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
SNCA-207ENST00000502987 PDE1AP54750 535 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 CNTN2Q02246 1040 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 SNX17Q15036 470 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 VPS53Q5VIR6 699 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 C1orf53Q5VUE5 145 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 ARMCX2Q7L311 632 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 RILPL2Q969X0 211 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 TRIM43Q96BQ3 446 aaPredicted RBP12.68□□□□□ -0.38
SNCA-207ENST00000502987 GMCL1Q96IK5 515 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 GLT1D1Q96MS3 346 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 STXBP5LQ9Y2K9 1186 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 PLIN4Q96Q06 1357 aa12.68□□□□□ -0.38
SNCA-207ENST00000502987 MOXD2PA6NHM9 499 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 DLL1O00548 723 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 ADAMTS4O75173 837 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 GNASQ5JWF2 1037 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 ZNF697Q5TEC3 545 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 PCSK9Q8NBP7 692 aaKnown RBP12.67□□□□□ -0.38
SNCA-207ENST00000502987 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
SNCA-207ENST00000502987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNCA-207ENST00000502987 ASB14A6NK59 587 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 FGAP02671 866 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 TKFCQ3LXA3 575 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 NSMFQ6X4W1 530 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 A1CFQ9NQ94 594 aaKnown RBP12.66□□□□□ -0.38
SNCA-207ENST00000502987 ANAPC4Q9UJX5 808 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 PRR12Q9ULL5 1215 aa12.66□□□□□ -0.38
SNCA-207ENST00000502987 SALL3Q9BXA9 1300 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 A0A0D9SFI3 127 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 MYADML2A6NDP7 307 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 FOXP2O15409 715 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 ORC4O43929 436 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 PLA2G6O60733 806 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 ASGR1P07306 291 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 SLC16A2P36021 539 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 HAND2P61296 217 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 TNFAIP2Q03169 654 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 FPGSQ05932 587 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
SNCA-207ENST00000502987 HDAC1Q13547 482 aaPredicted RBP12.65□□□□□ -0.38
SNCA-207ENST00000502987 ALX1Q15699 326 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
SNCA-207ENST00000502987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNCA-207ENST00000502987 DCAF4Q8WV16 495 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
SNCA-207ENST00000502987 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
SNCA-207ENST00000502987 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
SNCA-207ENST00000502987 MROH7Q68CQ1 1323 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 KIAA0355O15063 1070 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
SNCA-207ENST00000502987 TOP1P11387 765 aaKnown RBP12.64□□□□□ -0.39
SNCA-207ENST00000502987 ITGB8P26012 769 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
SNCA-207ENST00000502987 GJA9P57773 515 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 BEX3Q00994 111 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 FAAP100Q0VG06 881 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 MUM1L1Q5H9M0 696 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 EEPD1Q7L9B9 569 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 FAM133AQ8N9E0 248 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 FGD4Q96M96 766 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 TOX2Q96NM4 488 aa12.64□□□□□ -0.39
SNCA-207ENST00000502987 ZNF536O15090 1300 aa12.63□□□□□ -0.39
SNCA-207ENST00000502987 ELP1O95163 1332 aa12.63□□□□□ -0.39
SNCA-207ENST00000502987 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
SNCA-207ENST00000502987 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
SNCA-207ENST00000502987 TLR3O15455 904 aaKnown RBP12.63□□□□□ -0.39
SNCA-207ENST00000502987 DYNC1LI2O43237 492 aaPredicted RBP12.63□□□□□ -0.39
SNCA-207ENST00000502987 ADCY6O43306 1168 aa12.63□□□□□ -0.39
SNCA-207ENST00000502987 SYDE2Q5VT97 1194 aa12.63□□□□□ -0.39
SNCA-207ENST00000502987 CCSAPQ6IQ19 270 aaPredicted RBP12.63□□□□□ -0.39
SNCA-207ENST00000502987 TTBK2Q6IQ55 1244 aa12.63□□□□□ -0.39
SNCA-207ENST00000502987 TMEM47Q9BQJ4 181 aa12.63□□□□□ -0.39
SNCA-207ENST00000502987 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms