RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 DPCR1Q3MIW9 517 aa24.96■■□□□ 1.59
PTPN13-205ENST00000502971 NT5DC1Q5TFE4 455 aa24.96■■□□□ 1.59
PTPN13-205ENST00000502971 VCPKMTQ9H867 229 aa24.96■■□□□ 1.59
PTPN13-205ENST00000502971 PCDHA5Q9Y5H7 936 aa24.96■■□□□ 1.59
PTPN13-205ENST00000502971 A0A087WWV3 80 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 A0A087X0B3 334 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 BECN2A8MW95 431 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 BIN1O00499 593 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 OR52Z1P0C646 297 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 STAT2P52630 851 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 MCTP2Q6DN12 878 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 FBXO11Q86XK2 927 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 IQUBQ8NA54 791 aa24.95■■□□□ 1.59
PTPN13-205ENST00000502971 PLA2G6O60733 806 aa24.95■■□□□ 1.58
PTPN13-205ENST00000502971 PLCB2Q00722 1185 aa24.95■■□□□ 1.58
PTPN13-205ENST00000502971 TRAF1Q13077 416 aa24.95■■□□□ 1.58
PTPN13-205ENST00000502971 DHX40Q8IX18 779 aaKnown RBP24.95■■□□□ 1.58
PTPN13-205ENST00000502971 SPICE1Q8N0Z3 855 aa24.95■■□□□ 1.58
PTPN13-205ENST00000502971 DEFB129Q9H1M3 183 aa24.95■■□□□ 1.58
PTPN13-205ENST00000502971 FOXN1O15353 648 aa24.94■■□□□ 1.58
PTPN13-205ENST00000502971 AP5Z1O43299 807 aa24.94■■□□□ 1.58
PTPN13-205ENST00000502971 DDNO94850 711 aaPredicted RBP24.94■■□□□ 1.58
PTPN13-205ENST00000502971 SH3RF1Q7Z6J0 888 aa24.94■■□□□ 1.58
PTPN13-205ENST00000502971 AK8Q96MA6 479 aa24.94■■□□□ 1.58
PTPN13-205ENST00000502971 PRR12Q9ULL5 1215 aa24.94■■□□□ 1.58
PTPN13-205ENST00000502971 SARSP49591 514 aaKnown RBP24.93■■□□□ 1.58
PTPN13-205ENST00000502971 UBE2SQ16763 222 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 KIAA1755Q5JYT7 1200 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 APOBEC3FQ8IUX4 373 aaKnown RBP24.93■■□□□ 1.58
PTPN13-205ENST00000502971 TRIML1Q8N9V2 468 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 CHURC1Q8WUH1 139 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 SMARCE1Q969G3 411 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 HOOK2Q96ED9 719 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 L3MBTL3Q96JM7 780 aaPredicted RBP24.93■■□□□ 1.58
PTPN13-205ENST00000502971 NAP1L4Q99733 375 aaKnown RBP24.93■■□□□ 1.58
PTPN13-205ENST00000502971 CCDC39Q9UFE4 941 aa24.93■■□□□ 1.58
PTPN13-205ENST00000502971 ASTN2O75129 1339 aaPredicted RBP24.93■■□□□ 1.58
PTPN13-205ENST00000502971 CTNND1O60716 968 aaKnown RBP24.92■■□□□ 1.58
PTPN13-205ENST00000502971 SMC2O95347 1197 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 LMOD1P29536 600 aaPredicted RBP24.92■■□□□ 1.58
PTPN13-205ENST00000502971 E2F4Q16254 413 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 FAM83BQ5T0W9 1011 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 TEX2Q8IWB9 1127 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 SPATA20Q8TB22 786 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 PAGE5Q96GU1 130 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 SCAF8Q9UPN6 1271 aaKnown RBP24.92■■□□□ 1.58
PTPN13-205ENST00000502971 GLTPD2A6NH11 291 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 PPP4R3AQ6IN85 833 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 FAM160B2Q86V87 743 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 CCSER1Q9C0I3 900 aa24.92■■□□□ 1.58
PTPN13-205ENST00000502971 ATAD5Q96QE3 1844 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 SMTNL1A8MU46 457 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 PRR29P0C7W0 189 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 AP3B2Q13367 1082 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 DCAF15Q66K64 600 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 AOPEPQ8N6M6 819 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 FEM1BQ9UK73 627 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 MAN1B1Q9UKM7 699 aa24.91■■□□□ 1.58
PTPN13-205ENST00000502971 GCFC2P16383 781 aaKnown RBP24.9■■□□□ 1.58
PTPN13-205ENST00000502971 SARM1Q6SZW1 724 aa24.9■■□□□ 1.58
PTPN13-205ENST00000502971 EDIL3O43854 480 aa24.89■■□□□ 1.58
PTPN13-205ENST00000502971 UBA7P41226 1012 aa24.89■■□□□ 1.58
PTPN13-205ENST00000502971 GRAMD1CQ8IYS0 662 aa24.89■■□□□ 1.58
PTPN13-205ENST00000502971 MTMR9Q96QG7 549 aa24.89■■□□□ 1.58
PTPN13-205ENST00000502971 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.89■■□□□ 1.58
PTPN13-205ENST00000502971 SNAP25P60880 206 aa24.89■■□□□ 1.57
PTPN13-205ENST00000502971 CALCRLQ16602 461 aa24.89■■□□□ 1.57
PTPN13-205ENST00000502971 ISM2Q6H9L7 571 aa24.89■■□□□ 1.57
PTPN13-205ENST00000502971 PDXDC2PQ6P474 469 aa24.89■■□□□ 1.57
PTPN13-205ENST00000502971 POTEDQ86YR6 584 aa24.89■■□□□ 1.57
PTPN13-205ENST00000502971 ZNF341Q9BYN7 854 aa24.89■■□□□ 1.57
PTPN13-205ENST00000502971 ADARB2Q9NS39 739 aaKnown RBP24.89■■□□□ 1.57
PTPN13-205ENST00000502971 IKBKBO14920 756 aa24.88■■□□□ 1.57
PTPN13-205ENST00000502971 PTMAP06454 111 aaKnown RBP24.88■■□□□ 1.57
PTPN13-205ENST00000502971 MORC3Q14149 939 aa24.88■■□□□ 1.57
PTPN13-205ENST00000502971 NBPF12Q5TAG4 269 aaPredicted RBP24.88■■□□□ 1.57
PTPN13-205ENST00000502971 ANGEL2Q5VTE6 544 aaKnown RBP24.88■■□□□ 1.57
PTPN13-205ENST00000502971 FEZ1Q99689 392 aa24.88■■□□□ 1.57
PTPN13-205ENST00000502971 RANBP17Q9H2T7 1088 aaKnown RBP24.88■■□□□ 1.57
PTPN13-205ENST00000502971 DISC1Q9NRI5 854 aa24.88■■□□□ 1.57
PTPN13-205ENST00000502971 DACH1Q9UI36 760 aa24.88■■□□□ 1.57
PTPN13-205ENST00000502971 PPP2R3BQ9Y5P8 575 aa24.88■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L15C9J2P7 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L13C9JLJ4 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L11C9JVI0 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L18D6R9N7 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L22D6RA61 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L17D6RBQ6 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L19D6RCP7 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L20D6RJB6 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 MEIS2O14770 477 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 TDP2O95551 362 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 FOSP01100 380 aaPredicted RBP24.87■■□□□ 1.57
PTPN13-205ENST00000502971 EPS15P42566 896 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 AFMP43652 599 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP11P51784 963 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 TPM4P67936 248 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 USP17L24Q0WX57 530 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 DPYDQ12882 1025 aa24.87■■□□□ 1.57
PTPN13-205ENST00000502971 ZYXQ15942 572 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms