RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
COPB2-202ENST00000502734 RNF41Q9H4P4 317 aaPredicted RBP10.63□□□□□ -0.71
COPB2-202ENST00000502734 STARD7Q9NQZ5 370 aa10.63□□□□□ -0.71
COPB2-202ENST00000502734 TMEM39AQ9NV64 488 aa10.63□□□□□ -0.71
COPB2-202ENST00000502734 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
COPB2-202ENST00000502734 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
COPB2-202ENST00000502734 LAMA2P24043 3122 aaKnown RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 ELP1O95163 1332 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 ZMYM6O95789 1325 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 SYNRGQ9UMZ2 1314 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 ZNF213O14771 459 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 KIAA0355O15063 1070 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 PQBP1O60828 265 aaKnown RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 ICAM1P05362 532 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 RAG1P15918 1043 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 CST5P28325 142 aaPredicted RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 SLC16A2P36021 539 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 TNFAIP2Q03169 654 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 MUM1L1Q5H9M0 696 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 FAM109BQ6ICB4 259 aaPredicted RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 CWC27Q6UX04 472 aaKnown RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 ANKRD33Q7Z3H0 272 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 SLC17A8Q8NDX2 589 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 KATNBL1Q9H079 304 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 UPF3AQ9H1J1 476 aaKnown RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
COPB2-202ENST00000502734 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 CYP39A1Q9NYL5 469 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 COL6A3P12111 3177 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 MYH4Q9Y623 1939 aa10.62□□□□□ -0.71
COPB2-202ENST00000502734 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 MYADML2A6NDP7 307 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 HIP1O00291 1037 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 ADCY6O43306 1168 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 ASGR1P07306 291 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 ITGB8P26012 769 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 CDK7P50613 346 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 NKX3-2P78367 333 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 IRX5P78411 483 aaPredicted RBP10.61□□□□□ -0.71
COPB2-202ENST00000502734 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 CCDC178Q5BJE1 867 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 C9orf50Q5SZB4 431 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 ESR2Q92731 530 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 DIAPH3Q9NSV4 1193 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 PNMA2Q9UL42 364 aa10.61□□□□□ -0.71
COPB2-202ENST00000502734 FRMPD2Q68DX3 1309 aaPredicted RBP10.6□□□□□ -0.71
COPB2-202ENST00000502734 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.6□□□□□ -0.71
COPB2-202ENST00000502734 ARVCFO00192 962 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 DYNC1LI2O43237 492 aaPredicted RBP10.6□□□□□ -0.71
COPB2-202ENST00000502734 PDHBP11177 359 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 NT5C2P49902 561 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 BAATQ14032 418 aaPredicted RBP10.6□□□□□ -0.71
COPB2-202ENST00000502734 DGKHQ86XP1 1220 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 AP5M1Q9H0R1 490 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
COPB2-202ENST00000502734 GNEQ9Y223 722 aaKnown RBP10.6□□□□□ -0.71
COPB2-202ENST00000502734 STXBP5LQ9Y2K9 1186 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 FRMPD3Q5JV73 1810 aa10.6□□□□□ -0.71
COPB2-202ENST00000502734 MROH7Q68CQ1 1323 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 PLXNA1Q9UIW2 1896 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 A0A0U1RQG5 324 aaPredicted RBP10.59□□□□□ -0.71
COPB2-202ENST00000502734 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 CTAGE5O15320 804 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 ZEB2O60315 1214 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 CABYRO75952 493 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 TIMP1P01033 207 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 PRR29P0C7W0 189 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 SNHG28P0DPA3 235 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 SMPD1P17405 629 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 BEX3Q00994 111 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 TAPT1Q6NXT6 567 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 KIAA1211Q6ZU35 1233 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 EEPD1Q7L9B9 569 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 PURBQ96QR8 312 aaKnown RBP10.59□□□□□ -0.71
COPB2-202ENST00000502734 ZKSCAN3Q9BRR0 538 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 DSCC1Q9BVC3 393 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 CTNNA3Q9UI47 895 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 Q9Y3F1 56 aa10.59□□□□□ -0.71
COPB2-202ENST00000502734 SUPT16HQ9Y5B9 1047 aaKnown RBP10.59□□□□□ -0.71
COPB2-202ENST00000502734 ASTN1O14525 1302 aa10.58□□□□□ -0.71
COPB2-202ENST00000502734 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
COPB2-202ENST00000502734 NFIBO00712 420 aa10.58□□□□□ -0.72
COPB2-202ENST00000502734 TLR3O15455 904 aaKnown RBP10.58□□□□□ -0.72
COPB2-202ENST00000502734 KDM4AO75164 1064 aa10.58□□□□□ -0.72
COPB2-202ENST00000502734 EPHB4P54760 987 aa10.58□□□□□ -0.72
COPB2-202ENST00000502734 SMAD3P84022 425 aaKnown RBP10.58□□□□□ -0.72
COPB2-202ENST00000502734 FPGSQ05932 587 aa10.58□□□□□ -0.72
COPB2-202ENST00000502734 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
COPB2-202ENST00000502734 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms