RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 CIAO1O76071 339 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 GDF11O95390 407 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 BAG3O95817 575 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 CLTBP09497 229 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 IGFBP4P22692 258 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 IL15P40933 162 aaPredicted RBP5.28□□□□□ -1.56
MATR3-202ENST00000502422 ADCYAP1R1P41586 468 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 PPP4CP60510 307 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 TIMM10P62072 90 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 TLE2Q04725 743 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 USP17L24Q0WX57 530 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 RASGRF1Q13972 1273 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
MATR3-202ENST00000502422 NOLC1Q14978 699 aaKnown RBP eCLIP5.28□□□□□ -1.56
MATR3-202ENST00000502422 CCDC85BQ15834 202 aaPredicted RBP5.28□□□□□ -1.56
MATR3-202ENST00000502422 ZYXQ15942 572 aaKnown RBP5.28□□□□□ -1.56
MATR3-202ENST00000502422 GORABQ5T7V8 394 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 ATF7IPQ6VMQ6 1270 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 FOXP4Q8IVH2 680 aaPredicted RBP5.28□□□□□ -1.56
MATR3-202ENST00000502422 TRIM43Q96BQ3 446 aaPredicted RBP5.28□□□□□ -1.56
MATR3-202ENST00000502422 USP44Q9H0E7 712 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 GINM1Q9NU53 330 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 SLC5A4Q9NY91 659 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 RLFQ13129 1914 aa5.28□□□□□ -1.56
MATR3-202ENST00000502422 SEPT4O43236 478 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 HOXC6P09630 235 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 RFX5P48382 616 aaPredicted RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 USP14P54578 494 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 FPGSQ05932 587 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 MVPQ14764 893 aaKnown RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 LRSAM1Q6UWE0 723 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 C17orf53Q8N3J3 647 aaPredicted RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 NPLOC4Q8TAT6 608 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 NEUROD6Q96NK8 337 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 TMEM39AQ9NV64 488 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 LRP2BPQ9P2M1 347 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 TSR3Q9UJK0 312 aaKnown RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 AKAP2Q9Y2D5 859 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 PTPRCP08575 1304 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 PDS5AQ29RF7 1337 aaKnown RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 A0A1B0GUL7 405 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 STRNO43815 780 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 PQBP1O60828 265 aaKnown RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 HLA-DOAP06340 250 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 UBTFL1P0CB47 393 aaPredicted RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 CYBAP13498 195 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 ADORA1P30542 326 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 GRB14Q14449 540 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 SNX17Q15036 470 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 TERF2Q15554 542 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 PKN1Q16512 942 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 TMEM31Q5JXX7 168 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 C1orf53Q5VUE5 145 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 MCTP1Q6DN14 999 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 CCDC174Q6PII3 467 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 BLOC1S3Q6QNY0 202 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 RNF19BQ6ZMZ0 732 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 RNF180Q86T96 592 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 TGFBRAP1Q8WUH2 860 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 NSUN4Q96CB9 384 aaKnown RBP5.27□□□□□ -1.57
MATR3-202ENST00000502422 PRDM12Q9H4Q4 367 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 AATFQ9NY61 560 aaKnown RBP eCLIP5.27□□□□□ -1.57
MATR3-202ENST00000502422 TMEM63CQ9P1W3 806 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 CTNNA3Q9UI47 895 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 ZBTB21Q9ULJ3 1066 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 HDAC5Q9UQL6 1122 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 XIRP2A4UGR9 3374 aa5.27□□□□□ -1.57
MATR3-202ENST00000502422 DCDC2CA8MYV0 355 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 K7ELQ4 463 aaPredicted RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 ADORA2AP29274 412 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 LRRC41Q15345 812 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 CATSPERGQ6ZRH7 1159 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 TBC1D9Q6ZT07 1266 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 MAPKAPK5Q8IW41 473 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 SLC44A5Q8NCS7 719 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 TRPV1Q8NER1 839 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 PRR7Q8TB68 274 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 SH3RF3Q8TEJ3 882 aaPredicted RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 LRRN4Q8WUT4 740 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 XAGE2Q96GT9 111 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 TIGD1Q96MW7 591 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 RWDD1Q9H446 243 aaPredicted RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 GDPD2Q9HCC8 539 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 DDX41Q9UJV9 622 aaKnown RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 TCF20Q9UGU0 1960 aaKnown RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 GH2P01242 217 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 RARBP10826 455 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 ITGB8P26012 769 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 EPHB4P54760 987 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 PKP1Q13835 747 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 PRAMEF19Q5SWL8 479 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 OLFML2BQ68BL8 750 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 NAA16Q6N069 864 aaPredicted RBP5.26□□□□□ -1.57
MATR3-202ENST00000502422 SPATA5Q8NB90 893 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 ZBTB9Q96C00 473 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 SLC28A3Q9HAS3 691 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 CABP5Q9NP86 173 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 XPNPEP3Q9NQH7 507 aa5.26□□□□□ -1.57
MATR3-202ENST00000502422 HOXC10Q9NYD6 342 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms