RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 LRRC2Q9BYS8 371 aa19.46■□□□□ 0.71
ABCF3-218ENST00000498136 GPHNQ9NQX3 736 aaPredicted RBP19.46■□□□□ 0.71
ABCF3-218ENST00000498136 SH2B2O14492 632 aaPredicted RBP19.45■□□□□ 0.7
ABCF3-218ENST00000498136 KRT32Q14532 448 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 QRICH1Q2TAL8 776 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 MAMDC4Q6UXC1 1216 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 UBE2Q1Q7Z7E8 422 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 ZNF654Q8IZM8 581 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 TMTC2Q8N394 836 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 FAM133AQ8N9E0 248 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 DPF3Q92784 378 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 MYL10Q9BUA6 226 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 JMJD4Q9H9V9 463 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 NRBP1Q9UHY1 535 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 ZHX1Q9UKY1 873 aaPredicted RBP19.45■□□□□ 0.7
ABCF3-218ENST00000498136 PDE4DIPQ5VU43 2346 aa19.45■□□□□ 0.7
ABCF3-218ENST00000498136 PALM3A6NDB9 673 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-218ENST00000498136 TROAPQ12815 778 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 BAATQ14032 418 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-218ENST00000498136 COL9A3Q14050 684 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-218ENST00000498136 ARMCX2Q7L311 632 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 FBXO11Q86XK2 927 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 HOMER1Q86YM7 354 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 CCDC144CPQ8IYA2 1237 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 CTCFLQ8NI51 663 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-218ENST00000498136 C11orf49Q9H6J7 331 aa19.44■□□□□ 0.7
ABCF3-218ENST00000498136 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.44■□□□□ 0.7
ABCF3-218ENST00000498136 LCTP09848 1927 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 SOWAHBA6NEL2 793 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 ASB14A6NK59 587 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 DDAH1O94760 285 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 SNAI1O95863 264 aaPredicted RBP19.43■□□□□ 0.7
ABCF3-218ENST00000498136 RARBP10826 455 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 CALML3P27482 149 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 ADCK5Q3MIX3 580 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 RNF207Q6ZRF8 634 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 FGD4Q96M96 766 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 ABCB11O95342 1321 aa19.43■□□□□ 0.7
ABCF3-218ENST00000498136 ZNF865P0CJ78 1059 aaPredicted RBP19.42■□□□□ 0.7
ABCF3-218ENST00000498136 AKR1A1P14550 325 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 KIF5BP33176 963 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 LIFRP42702 1097 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 ACVR2BQ13705 512 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 SLC30A10Q6XR72 485 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 CLEC4DQ8WXI8 215 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 ABHD16BQ9H3Z7 469 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 ADD3Q9UEY8 706 aaKnown RBP19.42■□□□□ 0.7
ABCF3-218ENST00000498136 FAM184BQ9ULE4 1060 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
ABCF3-218ENST00000498136 KBTBD13C9JR72 458 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 ZBTB5O15062 677 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 FGD1P98174 961 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 TSGA10IPQ3SY00 556 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 GJC2Q5T442 439 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-218ENST00000498136 SYNE3Q6ZMZ3 975 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 ARRDC4Q8NCT1 418 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 PIBF1Q8WXW3 757 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 TCEANC2Q96MN5 208 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 PURBQ96QR8 312 aaKnown RBP19.41■□□□□ 0.7
ABCF3-218ENST00000498136 AMNQ9BXJ7 453 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 XPNPEP3Q9NQH7 507 aa19.41■□□□□ 0.7
ABCF3-218ENST00000498136 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
ABCF3-218ENST00000498136 BAZ2BQ9UIF8 2168 aaKnown RBP19.41■□□□□ 0.7
ABCF3-218ENST00000498136 HMGB1P09429 215 aaKnown RBP19.4■□□□□ 0.7
ABCF3-218ENST00000498136 CALM1P0DP23 149 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 CALM2P0DP24 149 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 CALM3P0DP25 149 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 RXRAP19793 462 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 HSPA4P34932 840 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 MNX1P50219 401 aaPredicted RBP19.4■□□□□ 0.7
ABCF3-218ENST00000498136 RPS6P62753 249 aaKnown RBP19.4■□□□□ 0.7
ABCF3-218ENST00000498136 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
ABCF3-218ENST00000498136 DHX32Q7L7V1 743 aaKnown RBP19.4■□□□□ 0.7
ABCF3-218ENST00000498136 RAB11FIP4Q86YS3 637 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 JAKMIP1Q96N16 626 aaKnown RBP19.4■□□□□ 0.7
ABCF3-218ENST00000498136 PIGSQ96S52 555 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 MAP3K14Q99558 947 aa19.4■□□□□ 0.7
ABCF3-218ENST00000498136 DNM1LO00429 736 aa19.39■□□□□ 0.69
ABCF3-218ENST00000498136 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.69
ABCF3-218ENST00000498136 EEPD1Q7L9B9 569 aa19.39■□□□□ 0.69
ABCF3-218ENST00000498136 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
ABCF3-218ENST00000498136 MCF2L2Q86YR7 1114 aa19.39■□□□□ 0.69
ABCF3-218ENST00000498136 LENG1Q96BZ8 264 aaPredicted RBP19.39■□□□□ 0.69
ABCF3-218ENST00000498136 SENP6Q9GZR1 1112 aaPredicted RBP19.39■□□□□ 0.69
ABCF3-218ENST00000498136 RIOX1Q9H6W3 641 aa19.39■□□□□ 0.69
ABCF3-218ENST00000498136 SNX14Q9Y5W7 946 aa19.39■□□□□ 0.69
ABCF3-218ENST00000498136 DDX49Q9Y6V7 483 aaKnown RBP19.39■□□□□ 0.69
ABCF3-218ENST00000498136 LRRC37A2A6NM11 1700 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 ASTN1O14525 1302 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 EVI5O60447 810 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 GNAQP50148 359 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 EXOSC10Q01780 885 aaKnown RBP19.38■□□□□ 0.69
ABCF3-218ENST00000498136 CCDC144BQ3MJ40 725 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 MTMR8Q96EF0 704 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 ALPK3Q96L96 1907 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 MPHOSPH6Q99547 160 aaKnown RBP19.38■□□□□ 0.69
ABCF3-218ENST00000498136 NAP1L2Q9ULW6 460 aaPredicted RBP19.38■□□□□ 0.69
ABCF3-218ENST00000498136 PCDHA1Q9Y5I3 950 aa19.38■□□□□ 0.69
ABCF3-218ENST00000498136 PNMA6FA0A0J9YX94 578 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms